DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pHCl-1 and glc-3

DIOPT Version :10

Sequence 1:NP_001261898.1 Gene:pHCl-1 / 39730 FlyBaseID:FBgn0264908 Length:978 Species:Drosophila melanogaster
Sequence 2:NP_504441.1 Gene:glc-3 / 178930 WormBaseID:WBGene00001593 Length:484 Species:Caenorhabditis elegans


Alignment Length:331 Identity:117/331 - (35%)
Similarity:175/331 - (52%) Gaps:23/331 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 ESSSDKEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRGTLTVNVNVLLLS 397
            ::|||.||:..|| .|.||.|:.||        |:         |...|...|.:.|.||:|:.|
 Worm    23 DASSDTEIIKKLL-GKGYDWRVRPP--------GI---------NLTIPGTHGAVIVYVNMLIRS 69

  Fly   398 LASPDESSLKYEVEFLLNQQWNDPRLQYG--NKSHYDFLNALHHHDSIWTPDTYFIMHGD-FKDP 459
            ::..|:.:::|.|:....::|.|.||.||  ..|..||| .|.....||.||::|..... .|..
 Worm    70 ISKIDDVNMEYSVQLTFREEWVDGRLAYGFPGDSTPDFL-ILTAGQQIWMPDSFFQNEKQAHKHD 133

  Fly   460 IIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKYVWKNDED 524
            |...:..:||.|:|.|.|::|..::|||...|..:|.|...|...:.|.:|.|..|:|.||..:.
 Worm   134 IDKPNVLIRIHRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDP 198

  Fly   525 TLRKSPSLTTLNAYLIKN-QTTACDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPGIILVTSSF 588
            ...|....::|.::.:.| .||.|...:..|.||||:..|...|..:||...::||..:||..|:
 Worm   199 VQLKKGLHSSLPSFELNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSW 263

  Fly   589 ITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCV 653
            ::|||:..||||||.:||||:|...|.::|..:.||.||...|::||.|.|:.||:.:||||..|
 Worm   264 VSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGALLEFAWV 328

  Fly   654 NYVGRK 659
            .|:..:
 Worm   329 TYISSR 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-1NP_001261898.1 LIC 339..>662 CDD:455710 114/325 (35%)
LGIC_TM <948..975 CDD:476813
TM4 helix 950..971 CDD:349850
glc-3NP_504441.1 LIC 29..475 CDD:455710 114/325 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.