Protein Alignment pHCl-1 and lgc-34

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: NP_493752.1
• Gene: lgc-34 / 173443
• WormBaseID: WBGene00020836
• Length: 390
• Species: Caenorhabditis elegans
• Alignment Length: 367
• Identity: 81/367 - (22%)
• Similarity: 137/367 - (37%)
• Gaps: 86/367 - (23%)

  Fly   336 SDKEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRGTLTVNVNVLLLSLAS 400
            ::.:|:..:|.:  ||....|||.|.           |.|         ..:.|..|:.:..|..
 Worm    29 TEGQIVGRILSE--YDSSSRPPVRDH-----------ADN---------SAILVITNIFINRLIW 71

  Fly   401 PDESSLKYEVEFLLNQQWNDPRLQY--GNKSHYDFLNALHHHDSIWTPDTYFIMHGDFKDPIIPM 463
            .:..:   ||:..|.|||.|.||:|  ..:...|.:. |..:..||.|||||....:..
 Worm    72 HNNYA---EVDLYLRQQWQDSRLKYDVDTREGIDEIR-LPGNRKIWEPDTYFTSGKELS------ 126

  Fly   464 HFALRIFRNGTITYAMRRHLILSCQGSLH---------------IFPFDDPK-CSFSMESISYEE 512
                |..:|.       :|:::...|.:.               :|||.:.: .:..:.|.:|:.
 Worm   127 ----RNEKNS-------KHIVVEPSGYIRSSERVLLELPYAYGTMFPFTNSRQFTIKLGSYNYDI 180

  Fly   513 AQIKYVWKNDEDTLRKSPSLTT---LNAYLIKNQTT-------ACDQNSWRGNYSCLQVELTFTR 567
            ..|.|:|.|       ||.|..   ::..|:|...|       .|..|...|.|||:...:.|:.
 Worm   181 DDIVYLWAN-------SPPLVNPIEVSQDLLKGDLTFEEASAGDCVGNYTVGVYSCIDAHVYFSA 238

  Fly   568 DRAYYFTTVFIPGIILVTSSFITFWL--EWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLT 630
            .......:.|:|.:.|:..|::.||:  .| :||..:...|.    ||..: .:...:...|...
 Worm   239 STISGLMSWFLPSLFLLIGSWLHFWIHGSW-SVPRTISAAVP----FFILA-AYYIFMREDSYTQ 297

  Fly   631 AMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGEN 672
            |...|...|:...:.|.:|:..|...|.:|.:......|.|:
 Worm   298 AQGAWLAFCLVLTFFSFVEYFLVICCGGRRSIRYKTLGPQED 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	57/255 (22%)
		Neur_chan_memb	578..>682	CDD:280999	22/97 (23%)
lgc-34	NP_493752.1	LIC	1..388	CDD:273305	81/367 (22%)
		LGIC_ECD_anion	58..237	CDD:349788	47/206 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D614790at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.110