Protein Alignment pHCl-1 and avr-14

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: NP_001020963.1
• Gene: avr-14 / 172270
• WormBaseID: WBGene00000232
• Length: 430
• Species: Caenorhabditis elegans
• Alignment Length: 453
• Identity: 140/453 - (30%)
• Similarity: 208/453 - (45%)
• Gaps: 92/453 - (20%)

  Fly   323 IHGIDWSKFDESSSDKEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRGTL 387
            ||.|   :......::||:..:|  |.||.|:.|                 ...||..|...|.:
 Worm    16 IHSI---RAKRKLKEQEIIQRIL--KDYDWRVRP-----------------RGMNATWPDTGGPV 58

  Fly   388 TVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRLQY------GNKSHYDFL------NALHHH 440
            .|.||:.|.|::..|:.:::|..:|...::|.|.||.|      |:.....|:      || ...
 Worm    59 LVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENA-DQS 122

  Fly   441 DSIWTPDTYFIMHGDFKDPIIPM-HFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFS 504
            ..||.|||:|....:.:..:|.. :..:||.:||.|.|::|..|:|||..||..:|.|...|...
 Worm   123 QQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSCPMSLEFYPLDRQNCLID 187

  Fly   505 MESISYEEAQIKYVWK-----NDEDTLRKS-PSLTTLNAYLIKNQTTACDQNSWRGNYSCLQVEL 563
            :.|.:|....|||.||     ..:|.||:| ||....:..     |..|...:..|.|||.:|.|
 Worm   188 LASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFELQDVV-----TDYCTSLTNTGEYSCARVVL 247

  Fly   564 TFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSN 628
            ...|:.:||...::||.|:||..|:::|||:.:||||||.:||||:|...|.::|..|.||.||.
 Worm   248 RLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINSKLPPVSY 312

  Fly   629 LTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYR---------PGENP----------V 674
            :.|::||.|||:.||:.:|||:..|||.|||..|.....:         |.:.|          .
 Worm   313 IKAVDVWIGVCLAFIFGALLEYAVVNYYGRKEFLRKEKKKKTRIDDCVCPSDRPPLRLDLSAYRS 377

  Fly   675 TQRLPAVLSRIGVILASPLASAAATPAMSMMGGATPMSSGTPAASSSVATPGTPRITDPEEFF 737
            .:||| ::.||..||::.:..:.....||                         |:|.|..||
 Worm   378 VKRLP-IIKRISEILSTNIDISRRVDLMS-------------------------RLTFPLTFF 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	73/246 (30%)
		Neur_chan_memb	578..>682	CDD:280999	50/122 (41%)
avr-14	NP_001020963.1	LIC	20..424	CDD:273305	137/446 (31%)
		Neur_chan_LBD	27..253	CDD:280998	74/250 (30%)
		Neur_chan_memb	260..>355	CDD:280999	45/94 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D614790at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.020