Protein Alignment pHCl-1 and Glra4

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: NP_034427.2
• Gene: Glra4 / 14657
• MGIID: 95750
• Length: 456
• Species: Mus musculus
• Alignment Length: 409
• Identity: 123/409 - (30%)
• Similarity: 201/409 - (49%)
• Gaps: 45/409 - (11%)

  Fly   338 KEILDLLLEKKRYDKRL--LPPVNDEDFCCGLQSPDMATNQNAR-RPHNRG-TLTVNVNVLLLSL 398
            |.:|.:.|.|:.....|  ..|::..||...|..  ..:..:|| ||:.:| .:.|..|:.:.|.
Mouse    19 KVLLSVALAKEDVKSGLKGSQPMSPSDFLDKLMG--RTSGYDARIRPNFKGPPVNVTCNIFINSF 81

  Fly   399 ASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHYDFLNALHHH--DSIWTPDTYFIMH--GDFKDP 459
            .|..|:::.|.|...|.||||||||.|  :.:.|....|...  ||||.||.:|...  .:|.:
Mouse    82 GSVTETTMDYRVNVFLRQQWNDPRLAY--REYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHE- 143

  Fly   460 IIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKYVWKNDED 524
            :...:..||||:||.:.|::|..|||||...|..||.|...|:..:||..|....:.:.|..|..
Mouse   144 VTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAP 208

  Fly   525 TLRKSPSLTTLNAYLIKNQTTA--CDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPGIILVTSS 587
            .::.:..| ||..::::::...  |.::...|.::|::|:....|...||...::||.:::|..|
Mouse   209 AVQVAEGL-TLPQFILRDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILS 272

  Fly   588 FITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVC 652
            :::||:..:|.||||.:|:||:|...|.|:|.|::||.||.:.|:::|..||:.|::|:|||:..
Mouse   273 WVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAA 337

  Fly   653 VNYVGRKRPLHNVVYRPGENPVTQRLPAVLSR--------IGVILASPLASAAATPAMSMMGGAT 709
            ||:|.|:   |....|.......||:...:.|        .|                  :|...
Mouse   338 VNFVSRQ---HKEFMRLRRRQRRQRMEEDIIRESRFYFRGYG------------------LGHCL 381

  Fly   710 PMSSGTPAASSSVATPGTP 728
            ....|.|...||:.:|..|
Mouse   382 QARDGGPMEGSSIYSPQPP 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	71/237 (30%)
		Neur_chan_memb	578..>682	CDD:280999	40/103 (39%)
Glra4	NP_034427.2	LIC	9..444	CDD:273305	123/409 (30%)
		Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430	236..241		1/4 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D614790at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.110