DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-1 and pHCl-1

DIOPT Version :10

Sequence 1:NP_001261898.1 Gene:pHCl-1 / 39730 FlyBaseID:FBgn0264908 Length:978 Species:Drosophila melanogaster
Sequence 2:XP_061508178.1 Gene:pHCl-1 / 1276287 VectorBaseID:AGAMI1_005729 Length:883 Species:Anopheles gambiae


Alignment Length:834 Identity:446/834 - (53%)
Similarity:526/834 - (63%) Gaps:167/834 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 RRQPDPAAHPASITKLSAISLHFHALAALAKTLQKHEDLSPVQDRQ--PLAYRAWQEHPYAETQM 249
            |....|.||..:.:...|     |..:..:.|:::|:|.....|.|  ||.:||.::    .||.
Mosquito   175 RSAASPMAHTVTPSSRPA-----HGSSTSSSTIRRHDDEPCRSDGQPVPLGHRAHRQ----PTQF 230

  Fly   250 PATMSAAIIANVGATAAATSAAAFQYLGQHYKHYSQSISFYAASSVLLMLCYLTTASTAAATQSE 314
            .|   .::..:|.|:...:..|:..:|.:|      |:..||||||||.|||||..:.|:.|   
Mosquito   231 HA---PSVQRDVAASPTTSRPASSHHLVRH------SLCLYAASSVLLALCYLTIPTVASDT--- 283

  Fly   315 TGALDKHPIHGIDWSKFDESSSDKEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATN---- 375
                 .|||.|  ..:|.|..|||||||.||:..||||||||||:|.|||||:.:|:||.:    
Mosquito   284 -----AHPIRG--RVRFAEGKSDKEILDHLLKNSRYDKRLLPPVDDADFCCGMHTPEMAKHIPDM 341

  Fly   376 QNARRPHNRGTLTVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHYDFLNALHHH 440
            :...||.|||||||||:||||||||||||||||||||||.|||.||||:|.|:|.|::|||:|||
Mosquito   342 RVPGRPQNRGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWFDPRLRYANQSQYEYLNAIHHH 406

  Fly   441 DSIWTPDTYFIMHGDFKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSM 505
            :.||.||||||||||||||||||||||||:|||||.|.|||||||||||.|:|||||||.|||::
Mosquito   407 EDIWLPDTYFIMHGDFKDPIIPMHFALRIYRNGTINYLMRRHLILSCQGRLNIFPFDDPLCSFAL 471

  Fly   506 ESISYEEAQIKYVWKNDEDTLRKSPSLTTLNAYLIKNQTTACD-QNSWR---------------- 553
            ||||||::.|.||||||||||||||||||||||||:|||.||. :.|||                
Mosquito   472 ESISYEQSAITYVWKNDEDTLRKSPSLTTLNAYLIQNQTIACPIKASWRAEGQTLSVEDEEFLCN 536

  Fly   554 ---------GNYSCLQVELTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTM 609
                     ||||||:|:|.||||||:||||||||||||||||||||||||||||||.|||||||
Mosquito   537 LCQRRFEEQGNYSCLKVDLIFTRDRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARSMIGVTTM 601

  Fly   610 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPV 674
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mosquito   602 LNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPV 666

  Fly   675 TQRLPAVLSRIGVILASPLASAAATPAMSM-MGGATPMSSGTPAASSSVATPGTPRITDPEEFFG 738
            ||||||||||||:||||||:|......:.. ...|......|||.::|||               
Mosquito   667 TQRLPAVLSRIGIILASPLSSRLLPETIDREFHTAIAAEKTTPATAASVA--------------- 716

  Fly   739 GGMRWQEAHGGIIGAAVQNLRARSIKRKAARSPSTSISPHPSGRPTEHIYEEPGGSTSGVTSTKV 803
                                 |.:..|.|...|..:::|..:..|.                   
Mosquito   717 ---------------------AATAGRLAQTPPHRTVAPAATVPPL------------------- 741

  Fly   804 KFKDELKEEQPEEAESSTKLRRSVATSTPALVVRI-EAEIDPEAED--------KPIQDMEMTER 859
                           ::..:...:|::.||..|.: |..:..:|..        :|..:.::.|.
Mosquito   742 ---------------ATAPIAPPIASAAPAAAVLLCEEGLATDASSAGPGLTRRRPTVETKLNEA 791

  Fly   860 QLSLPLKPPRRKASRSNSPASVYSDAFENVEATPGEKRQNAGAPNEIVACTTCGGSNSPCTHSAN 924
            .|                           :|.:.|.|::.:|.||||||||:|.|..||||||||
Mosquito   792 GL---------------------------METSFGVKKRESGGPNEIVACTSCAGGTSPCTHSAN 829

  Fly   925 NGCATETCFVQVRKKEPPHPIRVAKTIDVIARITFPTAYAIFLIFFFVHYKGFS 978
            ||||||||||||||||||||||||||||||||||||:|||:||||||:||||||
Mosquito   830 NGCATETCFVQVRKKEPPHPIRVAKTIDVIARITFPSAYAVFLIFFFIHYKGFS 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-1NP_001261898.1 LIC 339..>662 CDD:455710 270/352 (77%)
LGIC_TM <948..975 CDD:476813 23/26 (88%)
TM4 helix 950..971 CDD:349850 18/20 (90%)
pHCl-1XP_061508178.1 None

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