Protein Alignment pHCl-1 and Glra3

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: NP_446176.3
• Gene: Glra3 / 114516
• RGDID: 621229
• Length: 480
• Species: Rattus norvegicus
• Alignment Length: 404
• Identity: 122/404 - (30%)
• Similarity: 202/404 - (50%)
• Gaps: 67/404 - (16%)

  Fly   269 SAAAFQYLGQHYKHYSQSIS-FYAASSVLLMLCYLTTASTAAATQSETGALDKHPIHGIDWSKFD 332
            |..:|:.:. |.:|:...:| ||...:.||:....|..:.:|.::|.       |:
  Rat    10 SGISFRIMA-HVRHFRTLLSGFYFWEAALLLSLVATKETNSARSRSA-------PM--------- 57

  Fly   333 ESSSDKEILDLLLEK-KRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRG-TLTVNVNVLL 395
               |..:.||.|:.: ..||.|:                         ||:.:| .:.|..|:.:
  Rat    58 ---SPSDFLDKLMGRTSGYDARI-------------------------RPNFKGPPVNVTCNIFI 94

  Fly   396 LSLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHY--DFL----NALHHHDSIWTPDTYFIMH- 453
            .|..|..|:::.|.|...|.|:||||||.|   |.|  |.|    :.|   ||||.||.:|...
  Rat    95 NSFGSIAETTMDYRVNIFLRQKWNDPRLAY---SEYPDDSLDLDPSML---DSIWKPDLFFANEK 153

  Fly   454 -GDFKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKY 517
             .:|.: :...:..||||:||.:.|::|..|.|||...|..||.|...|...:||..|....:.:
  Rat   154 GANFHE-VTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIF 217

  Fly   518 VWKNDEDTLRKSPSLTTLNAYLIKNQTTA--CDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPG 580
            .|: ||..::.:..| ||..:|:|.:...  |.::...|.::|::|.....|...||...::||.
  Rat   218 EWQ-DEAPVQVAEGL-TLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPS 280

  Fly   581 IILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYA 645
            :::|..|:::||:..:|.||||.:|:||:|...|.|:|.|::||.||.:.|:::|..||:.|:::
  Rat   281 LLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFS 345

  Fly   646 SLLEFVCVNYVGRK 659
            :|||:..||:|.|:
  Rat   346 ALLEYAAVNFVSRQ 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	70/239 (29%)
		Neur_chan_memb	578..>682	CDD:280999	35/82 (43%)
Glra3	NP_446176.3	LIC	28..467	CDD:273305	118/385 (31%)
		Neur_chan_LBD	63..269	CDD:280998	71/239 (30%)
		Neur_chan_memb	276..464	CDD:280999	35/84 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D614790at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.110