Protein Alignment pHCl-1 and Glra3

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: NP_536686.3
• Gene: Glra3 / 110304
• MGIID: 95749
• Length: 464
• Species: Mus musculus
• Alignment Length: 394
• Identity: 120/394 - (30%)
• Similarity: 197/394 - (50%)
• Gaps: 66/394 - (16%)

  Fly   279 HYKHYSQSIS-FYAASSVLLMLCYLTTASTAAATQSETGALDKHPIHGIDWSKFDESSSDKEILD 342
            |.:|:...:| ||...:.||:....|..:.:|.::|.       |:            |..:.||
Mouse     3 HVRHFRTLVSGFYFWEAALLLSLVATKETNSARSRSA-------PM------------SPSDFLD 48

  Fly   343 LLLEK-KRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRG-TLTVNVNVLLLSLASPDESS 405
            .|:.: ..||.|:                         ||:.:| .:.|..|:.:.|..|..|::
Mouse    49 KLMGRTSGYDARI-------------------------RPNFKGPPVNVTCNIFINSFGSIAETT 88

  Fly   406 LKYEVEFLLNQQWNDPRLQYGNKSHY--DFL----NALHHHDSIWTPDTYFIMH--GDFKDPIIP 462
            :.|.|...|.|:||||||.|   |.|  |.|    :.|   ||||.||.:|...  .:|.: :..
Mouse    89 MDYRVNIFLRQKWNDPRLAY---SEYPDDSLDLDPSML---DSIWKPDLFFANEKGANFHE-VTT 146

  Fly   463 MHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKYVWKNDEDTLR 527
            .:..||||:||.:.|::|..|.|||...|..||.|...|...:||..|....:.:.|: ||..::
Mouse   147 DNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ-DEAPVQ 210

  Fly   528 KSPSLTTLNAYLIKNQTTA--CDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPGIILVTSSFIT 590
            .:..| ||..:|:|.:...  |.::...|.::|::|.....|...||...::||.:::|..|:::
Mouse   211 VAEGL-TLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVS 274

  Fly   591 FWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNY 655
            ||:..:|.||||.:|:||:|...|.|:|.|::||.||.:.|:::|..||:.|::::|||:..||:
Mouse   275 FWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339

  Fly   656 VGRK 659
            |.|:
Mouse   340 VSRQ 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	70/239 (29%)
		Neur_chan_memb	578..>682	CDD:280999	35/82 (43%)
Glra3	NP_536686.3	LIC	12..451	CDD:273305	118/385 (31%)
		Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O75311	235..240		1/4 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S5256
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D614790at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.060