Protein Alignment pHCl-1 and gabrd

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: XP_017951272.2
• Gene: gabrd / 100488161
• XenbaseID: XB-GENE-988598
• Length: 450
• Species: Xenopus tropicalis
• Alignment Length: 288
• Identity: 83/288 - (28%)
• Similarity: 142/288 - (49%)
• Gaps: 22/288 - (7%)

  Fly   380 RPHNRGT-LTVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHYDFLNALHHHDSI 443
            ||...|. :.|.|:|.:.|:....|.:::|.:...|:|.|.|.||.|.:.:....|:: ...:.:
 Frog    54 RPGIGGAPVIVAVDVEVTSIDHISEVNMEYTMTVFLHQSWRDERLSYNHTNKTLGLDS-RFVEKL 117

  Fly   444 WTPDTYFIMHGD---FKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSM 505
            |.||| ||::..   |.|..:. :..:|:..:|.|.|:.|....:||...|..:|.|:.:|...:
 Frog   118 WLPDT-FIVNAKSAWFHDVTVE-NKLIRLQPDGVILYSSRITSTVSCDMDLTKYPMDEQECMLEL 180

  Fly   506 ESISYEEAQIKYVWKNDEDTLRKSPSL--------TTLNAYLIKNQTTACDQNSWRGNYSCLQVE 562
            ||..|....|.|.|..:::   |:..|        |..|....||:...    ...|.:..|.:.
 Frog   181 ESYGYSSEDILYRWSENQE---KNHGLDKIELAQFTVTNYRFTKNEMIL----KSAGEFPRLSLH 238

  Fly   563 LTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVS 627
            ....|:|..|....::|.|:||..|:::||:...||||||.:|:||:|...|.....|::||..|
 Frog   239 FHLRRNRGVYIIESYVPSILLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARTSLPRAS 303

  Fly   628 NLTAMNVWDGVCMCFIYASLLEFVCVNY 655
            .:.|::|:..:|..|::|:|:|:...:|
 Frog   304 AVKALDVYFLICYVFVFAALVEYAFAHY 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	50/197 (25%)
		Neur_chan_memb	578..>682	CDD:280999	30/78 (38%)
gabrd	XP_017951272.2	LIC	42..448	CDD:273305	83/288 (29%)
		LGIC_ECD	61..244	CDD:355788	47/192 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910