Protein Alignment pHCl-1 and gabrd

DIOPT Version :10

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: XP_017951272.2
• Gene: gabrd / 100488161
• XenbaseID: XB-GENE-988598
• Length: 450
• Species: Xenopus tropicalis
• Alignment Length: 288
• Identity: 83/288 - (28%)
• Similarity: 142/288 - (49%)
• Gaps: 22/288 - (7%)

  Fly   380 RPHNRGT-LTVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHYDFLNALHHHDSI 443
            ||...|. :.|.|:|.:.|:....|.:::|.:...|:|.|.|.||.|.:.:....|:: ...:.:
 Frog    54 RPGIGGAPVIVAVDVEVTSIDHISEVNMEYTMTVFLHQSWRDERLSYNHTNKTLGLDS-RFVEKL 117

  Fly   444 WTPDTYFIMHGD---FKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSM 505
            |.||| ||::..   |.|..:. :..:|:..:|.|.|:.|....:||...|..:|.|:.:|...:
 Frog   118 WLPDT-FIVNAKSAWFHDVTVE-NKLIRLQPDGVILYSSRITSTVSCDMDLTKYPMDEQECMLEL 180

  Fly   506 ESISYEEAQIKYVWKNDEDTLRKSPSL--------TTLNAYLIKNQTTACDQNSWRGNYSCLQVE 562
            ||..|....|.|.|..:::   |:..|        |..|....||:...    ...|.:..|.:.
 Frog   181 ESYGYSSEDILYRWSENQE---KNHGLDKIELAQFTVTNYRFTKNEMIL----KSAGEFPRLSLH 238

  Fly   563 LTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVS 627
            ....|:|..|....::|.|:||..|:::||:...||||||.:|:||:|...|.....|::||..|
 Frog   239 FHLRRNRGVYIIESYVPSILLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARTSLPRAS 303

  Fly   628 NLTAMNVWDGVCMCFIYASLLEFVCVNY 655
            .:.|::|:..:|..|::|:|:|:...:|
 Frog   304 AVKALDVYFLICYVFVFAALVEYAFAHY 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	LIC	339..>662	CDD:455710	83/288 (29%)
		LGIC_TM	<948..975	CDD:476813
		TM4 helix	950..971	CDD:349850
gabrd	XP_017951272.2	LIC	42..448	CDD:455710	83/288 (29%)
		LGIC_ECD	61..244	CDD:475126	47/192 (24%)