Protein Alignment pHCl-1 and gabrr3

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: XP_017947352.2
• Gene: gabrr3 / 100487991
• XenbaseID: XB-GENE-6039478
• Length: 481
• Species: Xenopus tropicalis
• Alignment Length: 365
• Identity: 89/365 - (24%)
• Similarity: 168/365 - (46%)
• Gaps: 45/365 - (12%)

  Fly   333 ESSSDKEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRGT-LTVNVNVLLL 396
            :::|....:|....::...::|| .::|.||              |.||...|: :.|.::|.:.
 Frog    59 KNASKMRRIDSTKVRQMKSEQLL-RIDDHDF--------------AMRPGFGGSAIPVGIDVQIE 108

  Fly   397 SLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHYDFLNALHHHDSIWTPDTYFI------MHGD 455
            |:.|..|..:.:.:...|...|.|.||.:.:.::............||.||.:|:      :|..
 Frog   109 SIDSISEVDMDFTMTLYLRHYWKDERLSFQSTNNRSMTFDGRLIKKIWVPDVFFVHSKRSFIHDT 173

  Fly   456 FKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKYVWK 520
            ..:.|:     ||::.:|.:.:::|..:...|......||.|...||..:||.:|.|..:...||
 Frog   174 TMENIM-----LRVYPDGNVLFSLRITVTAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWK 233

  Fly   521 NDEDTLRKSPSLTTLNAYLIK-----NQTTACDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPG 580
            ...::| |:.....|:.:.|:     |.........|   |:.|.:.....|...::....:.|.
 Frog   234 RGNESL-KTDEHIALSQFFIEEFSASNGLAFYSSTGW---YNRLFINFILRRHIFFFLLQSYFPA 294

  Fly   581 IILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYA 645
            :::|..|:::||::..||||||.:|:||:|...|...|..:::|.||.:.|::|:..:...|::.
 Frog   295 MLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFL 359

  Fly   646 SLLEFVCVNYV----GRKRPLHNVVYRPGENPVTQRLPAV 681
            |::|:..|||:    .||:     :.|.|::..|..|.||
 Frog   360 SVIEYAAVNYLTTAEERKQ-----LKRRGKSSATLNLEAV 394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	51/239 (21%)
		Neur_chan_memb	578..>682	CDD:280999	36/108 (33%)
gabrr3	XP_017947352.2	LIC	77..480	CDD:273305	87/347 (25%)
		LGIC_ECD	98..283	CDD:355788	42/193 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910