Sequence 1: | NP_000224.2 | Gene: | LHCGR / 3973 | HGNCID: | 6585 | Length: | 699 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476702.1 | Gene: | rk / 34819 | FlyBaseID: | FBgn0003255 | Length: | 1360 | Species: | Drosophila melanogaster |
Alignment Length: | 707 | Identity: | 233/707 - (32%) |
---|---|---|---|
Similarity: | 365/707 - (51%) | Gaps: | 83/707 - (11%) |
- Green bases have known domain annotations that are detailed below.
Human 3 QRFSALQLLKLLLLLQPPLPRALREALCPEPCNCVPDGALRCPGPT---AGLTRLSLAYLPVKVI 64
Human 65 PSQAFRGLNEVIKIEISQIDSLERIEANAFDNL--LNLSEILIQNTKNLRYIEPGAFINLPRLKY 127
Human 128 LSICNTGIRKFPDVTKVFSSESNFILEICDNLHITTIPGNAFQGMNNESVTLKLYGNGFEEVQSH 192
Human 193 AFNG-TTLTSLELKENVHLEKMHNGAFRGATGPKTLDISSTKLQALPSYGLESIQRLIATSSYSL 256
Human 257 KKLPSRETFVNLLEATLTYPSHCCAFRNLP---TKEQNFSHSISE-------------------- 298
Human 299 -------NFSKQCES-------TVRKVNNKTLYS------------SMLAESELSGWDYEYGF-- 335
Human 336 ----------CLPKTPRCAPEPDAFNPCEDIMGYDFLRVLIWLINILAIMGNMTVLFVLLTSRYK 390
Human 391 LTVPRFLMCNLSFADFCMGLYLLLIASVDSQTKGQYYNHAIDWQTGSGCSTAGFFTVFASELSVY 455
Human 456 TLTVITLERWHTITYAIHLDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVE 520
Human 521 T-TLSQVYILTILILNVVAFFIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAP 584
Human 585 ISFFAISAAFKVPLITVTNSKVLLVLFYPINSCANPFLYAIFTKTFQRDFFLLLSKF 641 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LHCGR | NP_000224.2 | leucine-rich repeat | 51..74 | CDD:275380 | 7/22 (32%) |
LRR_5 | 62..198 | CDD:290045 | 33/138 (24%) | ||
leucine-rich repeat | 75..99 | CDD:275380 | 5/25 (20%) | ||
LRR 1 | 96..115 | 4/20 (20%) | |||
leucine-rich repeat | 100..124 | CDD:275380 | 3/23 (13%) | ||
LRR 2 | 124..145 | 5/20 (25%) | |||
leucine-rich repeat | 125..150 | CDD:275380 | 5/24 (21%) | ||
LRR 3 | 149..171 | 6/21 (29%) | |||
leucine-rich repeat | 151..174 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 175..198 | CDD:275380 | 6/23 (26%) | ||
LRR 4 | 175..196 | 5/20 (25%) | |||
LRR 5 | 198..220 | 7/21 (33%) | |||
leucine-rich repeat | 199..223 | CDD:275380 | 8/23 (35%) | ||
LRR 6 | 223..244 | 5/20 (25%) | |||
leucine-rich repeat | 224..244 | CDD:275380 | 5/19 (26%) | ||
7tm_1 | 376..623 | CDD:278431 | 122/247 (49%) | ||
rk | NP_476702.1 | leucine-rich repeat | 158..179 | CDD:275380 | |
LRR_RI | 180..>383 | CDD:238064 | 8/39 (21%) | ||
leucine-rich repeat | 183..204 | CDD:275380 | |||
LRR_8 | 203..263 | CDD:290566 | |||
leucine-rich repeat | 205..228 | CDD:275380 | |||
leucine-rich repeat | 229..252 | CDD:275380 | |||
LRR_8 | 252..311 | CDD:290566 | |||
leucine-rich repeat | 253..276 | CDD:275380 | |||
leucine-rich repeat | 277..300 | CDD:275380 | |||
LRR_8 | 299..359 | CDD:290566 | 4/14 (29%) | ||
leucine-rich repeat | 301..324 | CDD:275380 | |||
leucine-rich repeat | 325..348 | CDD:275380 | 0/3 (0%) | ||
LRR_RI | 327..567 | CDD:238064 | 56/234 (24%) | ||
leucine-rich repeat | 349..371 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 370..425 | CDD:290566 | 11/55 (20%) | ||
leucine-rich repeat | 372..393 | CDD:275380 | 3/21 (14%) | ||
leucine-rich repeat | 394..415 | CDD:275380 | 6/20 (30%) | ||
leucine-rich repeat | 418..486 | CDD:275380 | 15/75 (20%) | ||
leucine-rich repeat | 441..464 | CDD:275378 | 3/22 (14%) | ||
LRR_8 | 487..545 | CDD:290566 | 17/60 (28%) | ||
leucine-rich repeat | 487..510 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 511..534 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 533..589 | CDD:290566 | 15/56 (27%) | ||
leucine-rich repeat | 535..558 | CDD:275380 | 8/23 (35%) | ||
leucine-rich repeat | 559..580 | CDD:275380 | 5/20 (25%) | ||
7tm_4 | 764..>892 | CDD:304433 | 68/127 (54%) | ||
7tm_1 | 770..1017 | CDD:278431 | 122/247 (49%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |