DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DCP2 and Nudt8

DIOPT Version :9

Sequence 1:NP_001246776.1 Gene:DCP2 / 39722 FlyBaseID:FBgn0036534 Length:792 Species:Drosophila melanogaster
Sequence 2:XP_008758411.1 Gene:Nudt8 / 361692 RGDID:1309040 Length:225 Species:Rattus norvegicus


Alignment Length:125 Identity:29/125 - (23%)
Similarity:46/125 - (36%) Gaps:44/125 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 SVPTYGAILVSEDHNHCLL----VQSYFARNS---------WGFPKGKINE-NEDPAHCATREVY 359
            |.|...|:||.    .||:    ...|..|:|         ..||.||.:. ::|..|.|.||..
  Rat    27 SRPAAAAVLVP----LCLVRGVPALLYTLRSSRLVGRHKGEVSFPGGKCDPGDQDVIHTALRETQ 87

  Fly   360 EETGFDITDLIDANDYIEAFINYQYTRLY--------------------VVRNI-PMDTQ 398
            ||.|.::     :.:::...:...|.|:.                    |:.|: |:|.|
  Rat    88 EELGLEV-----SKEHVWGVLQPVYDRVSHPHPVTPSTPGDRRKATIVPVLANVGPLDLQ 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP2NP_001246776.1 DCP2 212..307 CDD:282833
Dcp2p 310..459 CDD:239644 28/124 (23%)
Nudt8XP_008758411.1 CoAse 31..201 CDD:239518 27/121 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.