DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCP2 and ndx-3

DIOPT Version :10

Sequence 1:NP_001246776.1 Gene:DCP2 / 39722 FlyBaseID:FBgn0036534 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_001380056.1 Gene:ndx-3 / 173857 WormBaseID:WBGene00003580 Length:240 Species:Caenorhabditis elegans


Alignment Length:209 Identity:50/209 - (23%)
Similarity:86/209 - (41%) Gaps:59/209 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 QRKLPSVGIKQF----AMQLF----QHIPFLNKHFGTVDQILDEWKNYKLSV--PTYGAILVSED 321
            ||.|.:|..::|    |.:.|    ..|| .:||...|.   |...|..:||  |     ||:.|
 Worm     8 QRSLINVCSRRFFGKDAKEQFLKNLSSIP-ASKHPRLVS---DSDANSAMSVLIP-----LVTVD 63

  Fly   322 HNHCLLV--QSYFARNSWG---FPKGKINENEDPAHCATREVYEETGFDITDLIDANDYIEAFI- 380
            ....:|:  :|...|:..|   ||.|:::..|.....|.||.:||.|.: .:.::...::::.| 
 Worm    64 GRDSVLLTKRSIHLRSHRGEVCFPGGRMDPGETTTETALRETFEEIGVN-AESVEIWGHLKSVIR 127

  Fly   381 ---NYQYTRLY-------VVRNIPMDTQFAPRTRNEIKCCDWFRIDALPVNKNDAISKAKLGKTS 435
               ::..|.:.       |:.|:.:::       :|::......||.|       |.||.|.|..
 Worm   128 RQADFNVTPIVGYISDERVLENLVVNS-------DEVQAVFTIPIDEL-------IKKAGLTKFQ 178

  Fly   436 NSFFMIMPFVKRLK 449
            :         ||:|
 Worm   179 S---------KRMK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP2NP_001246776.1 DCP2 212..306 CDD:428265 13/46 (28%)
NUDIX_Dcp2p_Nudt20 310..458 CDD:467540 35/158 (22%)
ndx-3NP_001380056.1 NUDIX_CoAse_Nudt7 54..221 CDD:467532 36/159 (23%)

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