DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CkIIalpha-i1 and ZNF479

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_150376.1 Gene:ZNF479 / 90827 HGNCID:23258 Length:524 Species:Homo sapiens


Alignment Length:513 Identity:107/513 - (20%)
Similarity:172/513 - (33%) Gaps:179/513 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AIEIDLEKPKFKSANKLLQRLFDWYKIDAA-------ILGENY-----------------CICEP 55
            |||..||               :|..:|.|       ::.|||                 |:.:.
Human    22 AIEFSLE---------------EWQCLDCAQRNLYRDVMLENYRNLVSLGIAVSKPDLITCLEQN 71

  Fly    56 CFGETLRISESLEKWGTAQDEFHR--RPIE-IDDSTAFQIKLEVTSNK---EEVETEKNDEENSF 114
            ...:.::.:|.:.|....:..|.:  :|.: |.||  .|..:..|..|   |:::.:|       
Human    72 KESQNIKRNEMVAKHPVTRSHFTQDLQPEQGIKDS--LQKVIPRTYGKCGHEKLQFKK------- 127

  Fly   115 DQHIAEPVKEDPLEKNEHMEIVVEESLKTASVDFFSVGLSRDGLAVTKFF-------KDKTQAT- 171
               ..:.|.|..:.|..:.|  |.:.|.|.....|...      ...|.|       :|||:.| 
Human   128 ---CCKSVGEYEVHKGGYSE--VNQCLSTTQNKIFQTH------KYVKVFGKFSNSNRDKTRYTG 181

  Fly   172 --RMLCTCCGHVLEILTHIRMHSCKPRPNPVYYCRDCGSEFH--KLHELHEHMKT---------- 222
              ...|...|....:|:|:..|.........|.|::||..|:  ..|..|:.:.|          
Human   182 NKHFKCNKYGKSFCMLSHLNQHQVIHTREKSYKCKECGKSFNCSSNHTTHKIIHTGEKPYRCEEC 246

  Fly   223 ----------MKHNKTMCGAKDLEFLCLRCNQIFPRYFDVIRHENSVH---------------NV 262
                      .:|.:|..|.|  .:.|..|.|.|.|...:..|:. :|               :|
Human   247 GKAFSWSANLTRHKRTHTGEK--PYTCEECGQAFRRSSALTNHKR-IHTGERPYKCEECGKAFSV 308

  Fly   263 SDFI--------------CVECNMSFANQGSYRRHTRSHKVKFTQQRFYECPYKDCTSSYRVWAR 313
            |..:              |.||..:|:...:..||.|.|    |:::.|.|  ::|..::.:.:.
Human   309 SSTLTDHKRIHTGEKPCRCEECGKAFSWSSNLTRHKRIH----TREKPYAC--EECGQAFSLSSN 367

  Fly   314 LMSHMSSHGLFSGFKSKVPSTQQE-----RRLLEGKFMTLDPMKRVEPDRRKLPYR----KKSF- 368
            ||.|...|   :|.|   |.|.:|     ||   ...:|:.  ||:....|  ||:    .|.| 
Human   368 LMRHRRIH---TGEK---PYTCEECGQDFRR---SSALTIH--KRIHTGER--PYKCEECGKVFS 419

  Fly   369 -------YAKADFPESPTKCTNGGEFISLPKKISLQK--------------GKYINLS 405
                   :.:....|.|.||...|:..||...::..|              ||..|.|
Human   420 LSSTLTDHKRIHTGERPYKCEECGKAFSLSSTLTDHKRIHTGERPYTCEECGKAFNCS 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 6/19 (32%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
C2H2 Zn finger 299..321 CDD:275368 5/21 (24%)
ZNF479NP_150376.1 KRAB 16..76 CDD:214630 12/68 (18%)
COG5048 <170..372 CDD:227381 44/210 (21%)
C2H2 Zn finger 187..207 CDD:275368 5/19 (26%)
C2H2 Zn finger 215..235 CDD:275368 6/19 (32%)
C2H2 Zn finger 243..263 CDD:275368 1/19 (5%)
C2H2 Zn finger 271..291 CDD:275368 6/20 (30%)
C2H2 Zn finger 299..319 CDD:275368 2/19 (11%)
COG5048 <323..479 CDD:227381 43/174 (25%)
C2H2 Zn finger 327..347 CDD:275368 7/19 (37%)
C2H2 Zn finger 355..375 CDD:275368 5/21 (24%)
C2H2 Zn finger 383..403 CDD:275368 6/24 (25%)
C2H2 Zn finger 411..431 CDD:275368 2/19 (11%)
C2H2 Zn finger 439..459 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..487 CDD:275368 4/11 (36%)
zf-H2C2_2 480..503 CDD:463886
C2H2 Zn finger 495..515 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.