DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIalpha-i1 and ZNF90

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_009069.1 Gene:ZNF90 / 7643 HGNCID:13165 Length:601 Species:Homo sapiens


Alignment Length:396 Identity:82/396 - (20%)
Similarity:145/396 - (36%) Gaps:100/396 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GENYCICEPCFGETLRISESLEKWGTAQDEFH--RRPIEIDD-STAFQIKLEVTSNKEEVETEKN 108
            ||....||.| |:.|:.|.:|    ||....|  .:|.:.|. ..||     ::|:...|....:
Human   253 GEKRYKCEDC-GKELKYSSTL----TAHKRIHTGEKPYKCDKCGRAF-----ISSSILYVHKISH 307

  Fly   109 DEENSFDQHIAEPVKEDPLEKNEHMEIVVEESLKTASVDFFSVGLSRDGLAVTKFFKDKTQATRM 173
            .||        :|.|.:...|          :.|.:|:           |:..|  :..|.....
Human   308 TEE--------KPYKCEECGK----------AFKLSSI-----------LSTHK--RIHTGEKPY 341

  Fly   174 LCTCCGHV----LEILTHIRMHSC-KPRPNPVYYCRDCGSEF--------HKL-------HELHE 218
            .|..||..    |.:.||.|:|:. ||     |.|..||..|        ||:       ::..|
Human   342 KCEECGKAFRRSLVLRTHKRIHTGEKP-----YKCDKCGKAFISSSLLYKHKISHSEKKPYKCEE 401

  Fly   219 HMKTMKHNKTM-----CGAKDLEFLCLRCNQIFPRYFDVIRHENSVHNVSDFICVECNMSFANQG 278
            ..|..|.:.|:     ...::..:.|..|:::|.|...:..|:........:.|.||..:|....
Human   402 CGKAFKRSSTLTIHKISHTEEKPYKCQECDKVFKRSSALSTHKIIHSGEKPYKCEECGKAFKRSS 466

  Fly   279 SYRRHTRSHKVKFTQQRFYECPYKDCTSSYRVWARLMSHMSSHGLFSGFKSKVPSTQQERRLLEG 343
                :..:||:..|:::.|:|  ::|..:::..:.|.:|...|...:.:|.:......:|..:..
Human   467 ----NLTTHKISHTEEKLYKC--QECDKAFKYSSALSTHKIIHSGENPYKCEECGKAFKRSSVLS 525

  Fly   344 KFMTLDPMKRVEPDRRKLPYR----KKSFYAKADFP--------ESPTKCTNGGEFISLPKKISL 396
            |...:....:        ||:    .|:|...:...        |.|.||...|:..:|...::.
Human   526 KHKIIHTGAK--------PYKCEECGKAFKRSSQLTSHKISHTGEKPYKCEECGKAFNLSSDLNT 582

  Fly   397 QKGKYI 402
            .|..:|
Human   583 HKRIHI 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 5/19 (26%)
C2H2 Zn finger 267..287 CDD:275368 4/19 (21%)
C2H2 Zn finger 299..321 CDD:275368 4/21 (19%)
ZNF90NP_009069.1 KRAB 4..62 CDD:214630
C2H2 Zn finger 175..195 CDD:275368
COG5048 202..588 CDD:227381 81/394 (21%)
C2H2 Zn finger 203..223 CDD:275368
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 259..279 CDD:275368 9/24 (38%)
C2H2 Zn finger 287..307 CDD:275368 5/24 (21%)
C2H2 Zn finger 315..335 CDD:275368 5/42 (12%)
C2H2 Zn finger 343..363 CDD:275368 7/19 (37%)
C2H2 Zn finger 371..391 CDD:275368 6/19 (32%)
C2H2 Zn finger 399..419 CDD:275368 4/19 (21%)
C2H2 Zn finger 427..447 CDD:275368 5/19 (26%)
C2H2 Zn finger 455..475 CDD:275368 6/23 (26%)
C2H2 Zn finger 483..503 CDD:275368 4/21 (19%)
C2H2 Zn finger 511..531 CDD:275368 2/19 (11%)
C2H2 Zn finger 539..559 CDD:275368 2/19 (11%)
C2H2 Zn finger 567..587 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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