DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CkIIalpha-i1 and zbtb11

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_012813021.2 Gene:zbtb11 / 734142 XenbaseID:XB-GENE-988913 Length:1117 Species:Xenopus tropicalis


Alignment Length:371 Identity:78/371 - (21%)
Similarity:126/371 - (33%) Gaps:136/371 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CKLC-----------------KDNRAIEIDLEKPKFKSANKLLQRLFDWYKIDAAILGENYCICE 54
            |::|                 :.::..:.|:.:..|.: |:.||.....:      .||:..:|.
 Frog   752 CEVCGKTFTHKHGLKMHQALHESHKQFKCDMCEKSFVT-NRSLQEHVSTH------TGESKYLCS 809

  Fly    55 PCFGETLRISESLEKWGTAQDEFHRRPIEIDDSTAFQIKLEVTSNKEEVET--------EKN-DE 110
            .|              |.|   |||         |..:...:..:|.:|||        ||: .|
 Frog   810 VC--------------GKA---FHR---------ASGLSKHLKKHKPKVETRGYHCTQCEKSFFE 848

  Fly   111 ENSFDQHIAEPVKEDPLEKNEHMEIVVEESLKTASVDFFSVGLSRDGLAVTKFFKDKTQATRMLC 175
            .....||:           |:|:.:                          |.|:         |
 Frog   849 LRDLQQHM-----------NKHLGV--------------------------KPFE---------C 867

  Fly   176 TCCGHVL----EILTHIRMHS-CKPRPNPVYYCRDCGSEFHKLHELHEHMKTMKHNKTMCGAKDL 235
            ..||...    :..:|::.|| .:|     |.|..||.||::......|:....|.|......:.
 Frog   868 EFCGKCYSWKKDWYSHVKSHSVTEP-----YRCSVCGKEFYEKALYRRHVNKATHGKKGRTKLNF 927

  Fly   236 EFLCLRCNQIFPRYFDVIRHENSVHNVSDFICVECNMSFANQGSYRRHTRSHKVKFTQQRFYECP 300
            |..|..|.:||.::.:..||.|:...|..|.|:.|.:::|:..|.:||.|:|    |.:|.|.||
 Frog   928 EKACEHCGKIFTQFREYRRHVNNHEGVKPFECLTCGVAWADARSLKRHVRTH----TGERPYVCP 988

  Fly   301 YKDCTSSYRVWARLMSHMSSHGLFSGFKSKVPSTQQERRLLEGKFM 346
            .  |...|.....|..||               |:..:..:.||.|
 Frog   989 V--CNEGYIDARTLRKHM---------------TKTHKDYVPGKIM 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 7/19 (37%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
C2H2 Zn finger 299..321 CDD:275368 7/21 (33%)
zbtb11XP_012813021.2 Integrase_H2C2 68..122 CDD:465569
BTB_POZ_ZBTB11 193..310 CDD:349511
C2H2 Zn finger 648..668 CDD:275370
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 724..744 CDD:275368
SFP1 <741..826 CDD:227516 17/106 (16%)
C2H2 Zn finger 752..772 CDD:275368 2/19 (11%)
C2H2 Zn finger 780..800 CDD:275368 5/20 (25%)
C2H2 Zn finger 808..828 CDD:275368 8/45 (18%)
C2H2 Zn finger 839..859 CDD:275368 6/30 (20%)
zf-H2C2_2 851..875 CDD:463886 9/69 (13%)
C2H2 Zn finger 867..887 CDD:275368 4/19 (21%)
C2H2 Zn finger 895..917 CDD:275370 6/21 (29%)
C2H2 Zn finger 931..951 CDD:275368 7/19 (37%)
C2H2 Zn finger 959..979 CDD:275368 7/19 (37%)
zf-H2C2_2 971..>990 CDD:463886 10/24 (42%)
C2H2 Zn finger 987..1008 CDD:275368 8/37 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.