DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CkIIalpha-i1 and Zfp977

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001349041.1 Gene:Zfp977 / 637776 MGIID:3645327 Length:438 Species:Mus musculus


Alignment Length:152 Identity:42/152 - (27%)
Similarity:58/152 - (38%) Gaps:22/152 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 LCTCCGHVLEILTHIRMHSCKPRPNPVYYCRDCGSEFHKLHELHEHMKTMKHNK----TMCGAKD 234
            ||..|......|..:|:|.........|.|..|...|.:|..|.||.:|....|    ..||...
Mouse   244 LCNLCDKAYSQLNLLRIHERTHTGEKPYICNQCNKTFAQLKYLREHERTHSGEKPYKCDQCGKAF 308

  Fly   235 LEFLCLRCNQIFPRYFDVIRHENSVHNVSDFICVECNMSFANQGSYRRHTRSHKVKFTQQRFYEC 299
            |...|||.            ||.:......:||.:||.:|:.|...|.|.|:|    |.::.|:|
Mouse   309 LHPSCLRV------------HERTHTGEKPYICNQCNKAFSQQSCLRIHKRTH----TGEKPYKC 357

  Fly   300 PYKDCTSSYRVWARLMSHMSSH 321
              ..|..:|...:.|..|..:|
Mouse   358 --HQCDKAYSQQSCLQMHERTH 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 5/19 (26%)
C2H2 Zn finger 267..287 CDD:275368 8/19 (42%)
C2H2 Zn finger 299..321 CDD:275368 5/21 (24%)
Zfp977NP_001349041.1 KRAB 4..44 CDD:460171
C2H2 Zn finger 109..125 CDD:275368
C2H2 Zn finger 133..153 CDD:275368
zf-H2C2_2 145..168 CDD:463886
C2H2 Zn finger 161..181 CDD:275368
COG5048 <185..369 CDD:227381 39/142 (27%)
C2H2 Zn finger 189..209 CDD:275368
C2H2 Zn finger 217..237 CDD:275368
C2H2 Zn finger 245..265 CDD:275368 5/19 (26%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 8/31 (26%)
C2H2 Zn finger 329..349 CDD:275368 8/19 (42%)
C2H2 Zn finger 357..377 CDD:275368 5/21 (24%)
zf-H2C2_2 370..394 CDD:463886 3/8 (38%)
C2H2 Zn finger 385..405 CDD:275368
zf-H2C2_2 397..422 CDD:463886
C2H2 Zn finger 413..433 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.