DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIalpha-i1 and ZNF562

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001123503.1 Gene:ZNF562 / 54811 HGNCID:25950 Length:426 Species:Homo sapiens


Alignment Length:455 Identity:90/455 - (19%)
Similarity:140/455 - (30%) Gaps:161/455 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 FHRRPIEIDDSTAFQIKLEVTSNKEEVETEKNDEENSFDQHIAEPVKE-----DPLEKNEHMEIV 136
            |.|.||     ..|:.|.::.:..|:..:....:..:||....|...|     |..:|..:.:::
Human    11 FPREPI-----CPFEEKTKIGTMVEDHRSNSYQDSVTFDDVAVEFTPEEWALLDTTQKYLYRDVM 70

  Fly   137 VEESLKTASVDFFSVGLS-------------RDGLAVTKFFKDKTQATR-----MLCTCCGHVLE 183
            :|..:..||||||....|             :.|....:.|......||     .||..||.|..
Human    71 LENYMNLASVDFFFCLTSEWEIQPRTKRSSLQQGFLKNQIFTGIQMQTRSYSGWKLCENCGEVFS 135

  Fly   184 ----ILTHIRMH--------SCKPRP-----------------NPV------------------- 200
                :.||:|..        :|..:.                 ||.                   
Human   136 EQFCLKTHMRAQNGGNTFEGNCYGKDSISVHKEASIGQELSKFNPCGKVFTLTPGLAVHLEILNG 200

  Fly   201 ---YYCRDCGSEFHKLHELHEHM------------------KTMKHNKTMC-----GAKDLEFLC 239
               |.|::||..|.....|..||                  .|..|.| .|     |.|..:  .
Human   201 RQPYKCKECGKGFKYFASLDNHMGIHIGEKLCEFQECERAITTSSHLK-QCVAVHTGKKSEK--T 262

  Fly   240 LRCNQIFPRYFDVIRHENSVHNVSDFICVECNMSFANQGSYRRHTRSHK-VK----------FTQ 293
            ..|.:.|..:..:..|..:......|.|.||..||.|..|:..|.:.|. :|          ||:
Human   263 KNCGKSFTNFSQLSAHAKTHKGEKSFECKECGRSFRNSSSFNVHIQIHTGIKPHKCTECGKAFTR 327

  Fly   294 Q-------------RFYECPYKDCTSSYRVWARLMSHMSSHGLFSGFKSKVPSTQQERRLLEGKF 345
            .             :.|||  |:|..::..:..|..|:.:|   :|.|   |...:|......:.
Human   328 STHLTQHVRTHTGIKPYEC--KECGQAFTQYTGLAIHIRNH---TGEK---PYQCKECGKAFNRS 384

  Fly   346 MTLDPMKRVEPDRRKLPYRKKSFYAKADFPESPTKCTNGGE-FISLPKKISLQKGKYINLSDNSR 409
            .||...:|:...                  |.|.:|...|: ||:     |..:.|::......|
Human   385 STLTQHRRIHTG------------------EKPYECVECGKTFIT-----SSHRSKHLKTHSGER 426

  Fly   410  409
            Human   427  426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 3/19 (16%)
C2H2 Zn finger 267..287 CDD:275368 8/19 (42%)
C2H2 Zn finger 299..321 CDD:275368 5/21 (24%)
ZNF562NP_001123503.1 KRAB 40..81 CDD:460171 9/40 (23%)
COG5048 <117..308 CDD:227381 39/193 (20%)
C2H2 Zn finger 181..198 CDD:275370 0/16 (0%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
COG5048 <258..420 CDD:227381 40/194 (21%)
C2H2 Zn finger 263..282 CDD:275368 3/18 (17%)
C2H2 Zn finger 290..310 CDD:275368 8/19 (42%)
C2H2 Zn finger 318..338 CDD:275368 2/19 (11%)
C2H2 Zn finger 346..366 CDD:275368 5/21 (24%)
C2H2 Zn finger 374..394 CDD:275368 4/19 (21%)
C2H2 Zn finger 402..422 CDD:275368 6/24 (25%)

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