DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIalpha-i1 and Zfp143

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001012169.2 Gene:Zfp143 / 361627 RGDID:1305662 Length:638 Species:Rattus norvegicus


Alignment Length:305 Identity:61/305 - (20%)
Similarity:115/305 - (37%) Gaps:69/305 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GETLRISESLEKWGTAQDEFHRRPIEIDDSTAFQIKLEVTSNKEEVETE-------KNDEENSFD 115
            |:.:::.:     |:|....|   :.|..||...::||   :.:.|:.|       .:..::|:|
  Rat    75 GQVIQLED-----GSAAYVQH---VPIPKSTGDSLRLE---DGQAVQLEDGTTAFIHHTSKDSYD 128

  Fly   116 QHIAEPVK-EDPLEKNEHMEIVVEE--------------SLKT----------ASVDFFSVGLSR 155
            |...:.|: ||......|..:.|.:              .|.|          ::::.::..:|.
  Rat   129 QSSLQAVQLEDGTTAYIHHAVQVPQPDTILAIQADGTVAGLHTGDATIDPDTISALEQYAAKVSI 193

  Fly   156 D---GLAVTKFFKDKTQATRMLCTCCGHVLEILTHIRMHSCKPRPNPVYYCR--DCGSEFHKLHE 215
            |   |:..|....:..|..:|.....||...:....:....|     .:.|:  .||    ||:.
  Rat   194 DGSEGVTSTGLIGENEQEKKMQIVLQGHATRVTPKSQQSGEK-----AFRCKYDGCG----KLYT 249

  Fly   216 LHEHMKTMKHNKTMCGAKDLEFLCLR--CNQIFPRYFDVIRHENSVHNVSDFICVE--CNMSFAN 276
            ...|:|.  |.::..|  |..:.|..  |.:.|...:.:..|..:......:.|.|  |..||..
  Rat   250 TAHHLKV--HERSHTG--DRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKT 310

  Fly   277 QGSYRRHTRSHKVKFTQQRFYECPYKDCTSSYRVWARLMSHMSSH 321
            .|..::|.|:|    |.:|.::||.:.|..|:........|:.:|
  Rat   311 SGDLQKHIRTH----TGERPFKCPIEGCGRSFTTSNIRKVHIRTH 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 4/21 (19%)
C2H2 Zn finger 267..287 CDD:275368 8/21 (38%)
C2H2 Zn finger 299..321 CDD:275368 5/21 (24%)
Zfp143NP_001012169.2 SFP1 <207..292 CDD:227516 19/97 (20%)
C2H2 Zn finger 239..261 CDD:275368 8/27 (30%)
COG5048 <251..424 CDD:227381 26/109 (24%)
C2H2 Zn finger 269..291 CDD:275368 4/21 (19%)
C2H2 Zn finger 299..321 CDD:275368 8/21 (38%)
C2H2 Zn finger 329..351 CDD:275368 5/21 (24%)
C2H2 Zn finger 359..381 CDD:275368
C2H2 Zn finger 389..411 CDD:275368
C2H2 Zn finger 419..438 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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