DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIalpha-i1 and Gzf1

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001101258.1 Gene:Gzf1 / 311508 RGDID:1562321 Length:707 Species:Rattus norvegicus


Alignment Length:475 Identity:96/475 - (20%)
Similarity:154/475 - (32%) Gaps:136/475 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KLCKDNRAIEIDLEKPKFKSANKLLQRLFDWYKIDAAILGENYCICEPCFGETLRISESLEKWGT 72
            |.||:....:.|:.||.|....:...||.. .|:...|..:.|         |.|:.|..:....
  Rat   200 KKCKEKLDKKKDVAKPPFPKIRRASGRLAG-KKVFVEIPKKKY---------TRRLREQQKSAEE 254

  Fly    73 A-------QDEF-HRRPIEID---DSTAFQIKLEVTSNKEEVETEKNDEENSFDQHIAEPVKEDP 126
            |       ||:. ....:|.:   .|.|....:|...:.::||.||.:||.          |:..
  Rat   255 AAKNDKCPQDQSPDNERVEAEPASKSEACPASVEREESLQKVEGEKEEEEG----------KDGE 309

  Fly   127 LEKNEHMEIVVEESLKTASVDFFSVGLSRDGLAV------------------------------- 160
            .:|..:.:..|.:........|........|:|.                               
  Rat   310 EKKKSNFQCTVCDKAFLYEKSFLKHIKYHHGVATEVVYRCDTCGQTFANRCNLKSHQRHVHSSER 374

  Fly   161 -------TKFFKDKTQATRML------------CTCCGHVLEILTHIRMHSCKPRPNPVYYCRDC 206
                   .|.||.|....|.:            |..||..|...|.:|:|......:..|.|..|
  Rat   375 HFPCEMCAKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKTALRLHERTHTGDKPYGCTKC 439

  Fly   207 GSEFHKLHELHEHMKTMKHNKTM----CGAK----------------DLEFLCLRCNQIFPRYFD 251
            .::|.:...|..|::.....:..    |||:                :..|:|..|.:.|... :
  Rat   440 DAKFSQPSALKTHLRVHTGERPFVCDECGARFTQNHMLIYHKRCHTGERPFMCETCGKSFASK-E 503

  Fly   252 VIRHENSVHNVS-DFICVECNMSFANQGSYRRHTRSHK-----------VKFTQ----QRFY--- 297
            .::|.|.:|..| .|.|..|..:||.:.|..:|.:.|.           .:|||    ||.:   
  Rat   504 YLKHHNRIHTGSKPFKCEVCLRTFAQRNSLYQHIKVHTGERPYCCDQCGKQFTQVNALQRHHRIH 568

  Fly   298 --ECPY--KDCTSSYRVWARLMSHMSSHGLFSGFKSKVPSTQQERRLLEGKFMTLDPMKRVEPDR 358
              |.||  ..|..::...:.|..|.|.|...:.:||.:.       :::|.....:..|..:||.
  Rat   569 TGEKPYMCNACGRTFTDKSTLRRHTSIHDKNTPWKSFLV-------IVDGSPKNDEGQKTEQPDE 626

  Fly   359 R----KLPYRKKSFYAKADF 374
            .    ||..|..||...:.|
  Rat   627 EYASPKLSDRLLSFGENSHF 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 5/19 (26%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 299..321 CDD:275368 6/23 (26%)
Gzf1NP_001101258.1 BTB_POZ 6..133 CDD:453885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..221 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..309 16/75 (21%)
C2H2 Zn finger 318..338 CDD:275370 2/19 (11%)
C2H2 Zn finger 349..370 CDD:275368 0/20 (0%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
COG5048 <411..539 CDD:227381 30/128 (23%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
C2H2 Zn finger 464..484 CDD:275368 3/19 (16%)
C2H2 Zn finger 492..512 CDD:275368 5/20 (25%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
zf-H2C2_2 532..557 CDD:463886 4/24 (17%)
C2H2 Zn finger 548..568 CDD:275368 5/19 (26%)
zf-H2C2_2 560..584 CDD:463886 6/23 (26%)
zf-C2H2 574..596 CDD:395048 5/21 (24%)
C2H2 Zn finger 576..596 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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