DRSC/TRiP Functional Genomics Resources

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Protein Alignment CkIIalpha-i1 and Zfp146

DIOPT Version :10

Sequence 1:NP_524096.2 Gene:CkIIalpha-i1 / 39721 FlyBaseID:FBgn0015025 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001392288.1 Gene:Zfp146 / 102555183 RGDID:7630088 Length:292 Species:Rattus norvegicus


Alignment Length:336 Identity:83/336 - (24%)
Similarity:122/336 - (36%) Gaps:88/336 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CEPCFGETLRISESLEKWGTAQDEFHRR--PIEIDD-STAFQIKLEVTSNKEEVETEK----NDE 110
            |:.| |:......:|    |..:.||.|  |.|.:: ..||..|..|..::.....||    ||.
  Rat    18 CKVC-GKLFSHKSNL----TEHEHFHNREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNDC 77

  Fly   111 ENSFDQHIAEPVKEDPLEKNEHMEIVVEESLKTASVDFFSVGLSRDGLAVTKFFKDKTQATRMLC 175
            ..||.|      ||:.|   .|.:|...|                      |.|:         |
  Rat    78 GKSFSQ------KENLL---THQKIHTGE----------------------KPFE---------C 102

  Fly   176 TCCGHVL----EILTHIRMHSC-KPRPNPVYYCRDCGSEFHKLHELHEHMKTMKHNKTMCGAKDL 235
            ..||...    .::.|.|.|:. ||     :.|::||..|.....|.|      |.|...|.|  
  Rat   103 KDCGKAFIQKSNLIRHQRTHTGEKP-----FICKECGKTFSGKSNLTE------HEKIHIGEK-- 154

  Fly   236 EFLCLRCNQIFPRYFDVIRHENSVHNVSDFICVECNMSFANQGSYRRHTRSHKVKFTQQRFYECP 300
            .|.|..|...|.:...:|:|:|.......:.|.||..:|:.:.|...|.|.|    :..:.||| 
  Rat   155 PFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIH----SGDKPYEC- 214

  Fly   301 YKDCTSSYRVWARLMSHMSSHGLFSGFKSKVPSTQQERRLLEGKFMTLDPMKRVEPDRRKLPYR- 364
             ..|..::...:.|..|:.||   :|.|   |....|......:|.||....|:...::  ||: 
  Rat   215 -NVCGKAFSQSSSLTVHVRSH---TGEK---PYGCNECGKAFSQFSTLALHLRIHTGKK--PYQC 270

  Fly   365 ---KKSFYAKA 372
               .|:|..|:
  Rat   271 SECGKAFSQKS 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CkIIalpha-i1NP_524096.2 C2H2 Zn finger 239..259 CDD:275368 6/19 (32%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
C2H2 Zn finger 299..321 CDD:275368 4/21 (19%)
Zfp146NP_001392288.1 COG5048 <1..260 CDD:227381 77/311 (25%)
C2H2 Zn finger 18..38 CDD:275368 5/24 (21%)
C2H2 Zn finger 46..66 CDD:275368 4/19 (21%)
C2H2 Zn finger 74..94 CDD:275368 9/28 (32%)
C2H2 Zn finger 102..122 CDD:275368 5/19 (26%)
C2H2 Zn finger 130..150 CDD:275368 8/25 (32%)
C2H2 Zn finger 158..178 CDD:275368 6/19 (32%)
C2H2 Zn finger 186..206 CDD:275368 7/19 (37%)
C2H2 Zn finger 214..234 CDD:275368 4/21 (19%)
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
zf-H2C2_2 255..279 CDD:463886 6/25 (24%)
C2H2 Zn finger 270..290 CDD:275368 3/12 (25%)

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