DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and galnt9

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_001338018.1 Gene:galnt9 / 797549 ZFINID:ZDB-GENE-060526-21 Length:604 Species:Danio rerio


Alignment Length:608 Identity:177/608 - (29%)
Similarity:283/608 - (46%) Gaps:115/608 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RHKKKVLPLLLLMAIGSIIYYLY--------------TLKLEGERDESATSTTS--------RLE 49
            |..|.:|.:.:|:.:|.|::.:|              .|..:..|..:|..|.|        |||
Zfish     5 RKIKTLLTVNILVFVGIILFSVYCRIQDRSEELVQIGRLSDQRLRGRNAKVTNSMDRQSILKRLE 69

  Fly    50 RDIRDLQAVFESEVIPDLGALGRP--------------ARGNWTEEQLEAIAKSQRETGYNAWLS 100
            |        .|..|...|..|.:|              |.....|:..|...:.: |.||||.||
Zfish    70 R--------LEDVVYNQLNGLAKPMGLVEGPGGLGQGGAAATLGEDSRETEGRFE-EYGYNAQLS 125

  Fly   101 KRISPERSLYDMRHRSCKKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVIL 165
            .|||.:|::.|.|.:.||:|.| .:.||.:|||..:.||..||:||::.|:.:.||..||:|:||
Zfish   126 DRISLDRNIPDYRPKKCKQLTY-SDDLPQISVVFIFVNEALSVILRSVHSMVNHTPAHLLKEIIL 189

  Fly   166 VDDGSTQADEKLN--DFIKIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKG 228
            |||.|...:.|.|  .::..::..:|:..|.:.:.||:.||:.|...|.|.|:.|.|:|||....
Zfish   190 VDDNSDSVELKFNLDHYVNKRYPGLVKIVRNSKREGLIRARIHGWNAATAPVVGFFDAHVEFNTA 254

  Fly   229 WLEPLIAPILEDNRTCTTPIIDTIDFDNFAYRRGKPSRGFFNWEF--NYIQLPLLKEEAVAMPAP 291
            |.||::..:.||:.....|.||.|.::.|..::...:...:||..  .||..|....:.....||
Zfish   255 WAEPILTRVKEDHTRIILPAIDNIKYNTFEVQQYANAAHGYNWGLWCMYIIPPQDWLDRGDETAP 319

  Fly   292 HKNPIMNGGLFAIGREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGN 356
            .:.|.|.|..|.:.||:|.|:|..|.|::::|.|..||.:::|.|||.:..:||:||.|:.|   
Zfish   320 IRTPAMIGCSFVVDREYFGEIGLLDPGMEVYGGENIELGMRVWQCGGSMEVLPCARVAHIER--- 381

  Fly   357 FQIRYTNKDKNSE-KKLISRNYRRVAEIWLDEYKDKLFA--NMP-HLTVIPVGNLAEQRDLKNRL 417
                 |.|..|:: .....||..|.||:|:||:|..::.  |:| :...:..|:::|:..|:.::
Zfish   382 -----TKKPYNNDIDYYAKRNALRAAEVWMDEFKSHVYMAWNIPMNNPGVDFGDVSERVALRKKM 441

  Fly   418 HCKPFKWFLDNLATDFLNLY----------------------------PILDP--------AEYA 446
            :||.|:|:|:::..: :.:|                            .||.|        |.|.
Zfish   442 NCKSFRWYLEHVYPE-MRIYNNTITYGEVRNSKASGYCLDQGSEEDERAILYPCHGMSSQLARYT 505

  Fly   447 S-GVLQ--SISSPKLCLDRK---DPSHGQ-PKLAPCSSDHVFPSPEQYWSLTNHREL--RSGFYC 502
            : |:||  .:.|.....|.|   |...|: |.|..|  |.|..|.::.|..|.:..:  |....|
Zfish   506 TEGLLQLGPLGSTTFLPDTKCLVDDGRGRTPSLKKC--DSVTRSSQRLWDFTQNGPIISRDTGRC 568

  Fly   503 LEVR-----NHGVNVHIYQCHGQ 520
            |||.     |.|:.:.:.:|.||
Zfish   569 LEVEMSKDANFGLRLVVQRCSGQ 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 102/306 (33%)
pp-GalNAc-T 131..430 CDD:133004 102/306 (33%)
Ricin_B_lectin 446..570 CDD:279046 26/89 (29%)
RICIN 448..572 CDD:238092 26/86 (30%)
galnt9XP_001338018.1 pp-GalNAc-T 155..454 CDD:133004 102/306 (33%)
Ricin_B_lectin 465..593 CDD:279046 31/129 (24%)
RICIN 467..595 CDD:238092 31/127 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586967
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.