DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant8 and galnt4

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001072705.1 Gene:galnt4 / 780162 XenbaseID:XB-GENE-5803663 Length:582 Species:Xenopus tropicalis


Alignment Length:593 Identity:181/593 - (30%)
Similarity:274/593 - (46%) Gaps:119/593 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 STTSRLERDI-------RDLQAVFESEVIPD---LGALGRPARGNW--TEEQLEAIAKSQRETGY 95
            :|..|.||.|       .:|:.....:..||   .|..|:.||...  ||::::  .:|..:...
 Frog    44 TTKRRWERVITLAEEKNEELRQPVYKKPPPDPNMPGEWGKAARLELGPTEKKMQ--DESIEKYAL 106

  Fly    96 NAWLSKRISPERSLYDMRHRSCKKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLL 160
            |.:||.:||..|.:.|.|...||...:...|||:.||||.::||..|.||||:.|:...:|..||
 Frog   107 NIYLSDQISLHRHIMDNRMYECKSKTFNYRKLPTTSVVIAFYNEALSTLLRTIHSVLETSPAVLL 171

  Fly   161 REVILVDDGSTQA--DEKLNDFIKIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHV 223
            ||:|||||.|.:.  ..:|.|:  |..|:.|:..|.|.:.||:.||::||..|:.|||.|||.|.
 Frog   172 REIILVDDFSDKVYLKSQLEDY--IGGLDRVRLIRTTKREGLVRARIIGATYAIGDVLTFLDCHC 234

  Fly   224 EVTKGWLEPLIAPILEDNRTCTTPIIDTIDFDNFAY--RRGKPSRGFFNWEFNYIQLPLLKEEAV 286
            |...||||||:..|.|:......|:|||||::.|.:  :.|:|..|.|:|...:....:.::|..
 Frog   235 ECISGWLEPLLQRIGENETAVVCPVIDTIDWNTFEFYMQTGEPMIGGFDWRLTFQWHAVPEKERQ 299

  Fly   287 AMPA---PHKNPIMNGGLFAIGREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRV 348
            ...:   |.::|.|.|||||:.:::|..||.||.|:::||.|..|||.::|.|||.:...|||.|
 Frog   300 RRKSRIDPIRSPTMAGGLFAVSKKYFEYLGTYDMGMEVWGGENLELSFRVWQCGGTLEIEPCSHV 364

  Fly   349 GHLFRDGNFQIRYTNKDKNSEKKLISRNYRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDL 413
            ||:|          .|.....:....:|..|.||:|:|.||:..:...|.......|:::|::.|
 Frog   365 GHVF----------PKKAPYARPNFLQNTARAAEVWMDGYKELFYNRNPPARKENYGDISERKLL 419

  Fly   414 KNRLHCKPFKWFLDNLATDFLNLYPILDPAEYASGVLQSISSPKLCLDRKDPSHGQPKLAPCSSD 478
            :.||.||.|.|:|.|:..| |:: |...|..:  |.::|:.....|||...|.|.          
 Frog   420 RERLQCKSFDWYLKNVFPD-LHI-PEDRPGWH--GAVRSMGISNECLDYNAPDHN---------- 470

  Fly   479 HVFPSPEQYWSLTNHRELRSGFYCLEVRNHGVNVHIYQCHGQSGNQFWS--------FDSKTHQV 535
               |:                         |.::.::.||||.||||:.        |:|.|...
 Frog   471 ---PT-------------------------GAHLSLFGCHGQGGNQFFEYTTMREIRFNSVTELC 507

  Fly   536 IS-GQQQNFRHCLEAQPELNAVTSSV-----------------------------------CDPK 564
            .. .:||.:...:....:.|.|..::                                   |||.
 Frog   508 AEVPEQQTYIGMMHCPKDGNPVPKNIAWEFRNDGTIYHPSSGTCISSYRTSEGRADVQMKGCDPS 572

  Fly   565 NHKQQWKF 572
            :..|.|||
 Frog   573 DKNQLWKF 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 117/305 (38%)
pp-GalNAc-T 131..430 CDD:133004 118/305 (39%)
Ricin_B_lectin 446..570 CDD:279046 28/167 (17%)
RICIN 448..572 CDD:238092 29/167 (17%)
galnt4NP_001072705.1 pp-GalNAc-T 142..436 CDD:133004 118/305 (39%)
Ricin_B_lectin 450..578 CDD:395527 28/165 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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