DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and galnt2

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_009305623.1 Gene:galnt2 / 570248 ZFINID:ZDB-GENE-041111-110 Length:565 Species:Danio rerio


Alignment Length:608 Identity:195/608 - (32%)
Similarity:302/608 - (49%) Gaps:81/608 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RHKKKVLPLLLLMAIGSIIYYLYTLKLEGERDESATSTTSRLE----RDIRD-------LQAVFE 60
            |.|.::.....::.:..|.||.|:......:|:.:...::|::    .|.:|       |..|..
Zfish     2 RRKSRMYLCFAVLWVLGIAYYFYSGTTLSRKDDWSGINSNRIQTHSNADDKDHSLESLPLGKVRW 66

  Fly    61 SEVIPDL--GA-LGRPARGNWTEEQLEAIAKSQRETGYNAWLSKRISPERSLYDMRHRSCKKLKY 122
            .:...||  || :.||.:..:...:            :|...|.::..:|::.|.||..|:..::
Zfish    67 QDYDQDLYVGATVVRPGQDPYARNK------------FNQVESDKLRMDRNIPDTRHDHCRHKQW 119

  Fly   123 PMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQADE--KLNDFIKIKF 185
            ..: ||:.|||||:|||..|.||||:.|:..::|..|::|:|||||.|...::  .|....|::.
Zfish   120 RTD-LPASSVVITFHNEARSALLRTVISVLKKSPPHLVKEIILVDDYSDNPEDGALLGKIEKVRV 183

  Fly   186 LNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNRTCTTPIID 250
            |      |...:.|||.:||.||:.|.|.||.|||||.|..:.|||||:..:.||.....:||||
Zfish   184 L------RNDRREGLMRSRVRGADAATASVLTFLDSHCECNEHWLEPLLERVAEDKTRVVSPIID 242

  Fly   251 TIDFDNFAYRRGKPS-RGFFNW----EFNYIQLPLLKEEAVAMPAPHKNPIMNGGLFAIGREWFS 310
            .|:.|||.|...... :|.|:|    :::|:.|...:.......||.|.|::.||||.:.:::|.
Zfish   243 VINMDNFQYVGASADLKGGFDWNLVFKWDYMTLEQRRARQGNPIAPIKTPMIAGGLFVMDKDYFE 307

  Fly   311 ELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSEKKLISR 375
            |||.||..:.:||.|..|:|.::|.|||.:..:|||||||:||.   |..||  .......:.:|
Zfish   308 ELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK---QHPYT--FPGGSGTVFAR 367

  Fly   376 NYRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDFLNLYPIL 440
            |.||.||:|:|::|:..:|.:|....:|.||:..:.::|.||.||||||:|:       |:||.|
Zfish   368 NTRRAAEVWMDDFKNFYYAAVPSARNVPYGNIQSRLEMKKRLGCKPFKWYLE-------NVYPEL 425

  Fly   441 ---DPAEYASGVLQSISSPKLCLDRKDP-SHGQPKLAPC--SSDHVFPSPEQYWSLTNHRELRSG 499
               |..:.|.|.||...:   |||.... :.|...:..|  :..:...:..|.|:||..:.::..
Zfish   426 RVPDHQDIAFGALQQGQN---CLDTLGHFADGVVGVYECHNAGGNQVSNKTQEWALTKDKSVKHM 487

  Fly   500 FYCLEV--RNHGVNVHIYQCHGQSGNQFW-SFDSKTHQVISGQQQNFRH-----CLEAQ-PELNA 555
            ..||.|  |..|..:.:..|......|.| ..|:.|         ..||     ||::: .....
Zfish   488 DLCLTVVDRTAGSQIKLQGCRENDTRQKWEQIDNNT---------KLRHVGSNLCLDSRSARSGG 543

  Fly   556 VTSSVCDPKNHKQQWKFGYLNSQ 578
            :|..||.| :..||||| .||.|
Zfish   544 LTVEVCSP-SLTQQWKF-TLNLQ 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 124/305 (41%)
pp-GalNAc-T 131..430 CDD:133004 124/305 (41%)
Ricin_B_lectin 446..570 CDD:279046 32/135 (24%)
RICIN 448..572 CDD:238092 33/135 (24%)
galnt2XP_009305623.1 pp-GalNAc-T 127..422 CDD:133004 125/312 (40%)
Glyco_tranf_2_3 127..351 CDD:290369 96/229 (42%)
Ricin_B_lectin 434..557 CDD:279046 32/135 (24%)
RICIN 444..559 CDD:238092 30/124 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.