DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and galnt8a.2

DIOPT Version :10

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_073799092.1 Gene:galnt8a.2 / 568500 ZFINID:ZDB-GENE-131122-40 Length:609 Species:Danio rerio


Alignment Length:640 Identity:190/640 - (29%)
Similarity:299/640 - (46%) Gaps:117/640 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLMAIGSIIYYLYTLK-LEGERDESAT----------STTSRLERDIRDL----------QAVFE 60
            :|..||.|:|.:..:. :..||:..:|          ....|:|.::.::          :||.:
Zfish     9 VLFIIGIIVYSVVNVSFIRPERNNDSTLQKPEEIELFQRLKRIEDEVHEIAINIKNQNVKEAVVK 73

  Fly    61 SEV--------IPDLGALGRPARGNWTEEQLEAIAKSQRETGYNAWLSKRISPERSLYDMRHRSC 117
            .::        :....||.:......|||:.....|..:|.|||.:||.|:...|::.|.|...|
Zfish    74 QKITKKTEVKKLYPKSALFKTWGAELTEEEQMEAEKLFQEFGYNVFLSNRLPLNRTIPDTRDPRC 138

  Fly   118 KKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQADEKLN---- 178
            ....||.: ||::||::.|.||..||:.|.:.|:..:||..||:|::||||.|:..|.||.    
Zfish   139 SLKIYPKD-LPTISVILIYLNEALSVIKRAVQSIIDKTPAHLLKEIVLVDDNSSNEDLKLPLDKY 202

  Fly   179 -DFI---KIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILE 239
             |.|   |...:..|:|::   |:||..||:.|.|.|...|:..||:|:||.|.|.|||:|.|..
Zfish   203 IDLINKGKPGLIKKVRHKK---QMGLAKARMSGWEAATGQVVAILDAHIEVHKEWAEPLLAQIKA 264

  Fly   240 DNRTCTTPIIDTIDFDNFAYRRGKPSRGFFNWEFNYIQLPLLKEEAVAM--PA-PHKNPIMNGGL 301
            :..|..:|:.|.:.||.....:..|:...|:|.. :......:.|...:  |: |.|:|.:.|.|
Zfish   265 NRTTVLSPVFDKVLFDTLEVIKYNPAAHAFDWSL-WCMYERFRPEWYKLKDPSEPGKSPSVMGIL 328

  Fly   302 FAIGREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDK 366
            .| .||:..|:|..|:|:.|:|.|..||.:::|||||.:..||||::.|:.|        .:|..
Zfish   329 VA-DREFLGEIGVLDEGMTIYGGENVELGIRVWLCGGSVEVVPCSKIAHVER--------AHKPY 384

  Fly   367 NSE-KKLISRNYRRVAEIWLDEYKD--KLFANMP---HLTVIPVGNLAEQRDLKNRLHCKPFKWF 425
            :.: .||:.||..||||||:||||.  .:..|:|   |  .|.:||:.|::.|:.:|.||||||:
Zfish   385 SPDLSKLMIRNALRVAEIWMDEYKSNVNIAWNLPLKDH--GIDIGNVTERKQLREKLKCKPFKWY 447

  Fly   426 LDNLATDFLNLYPILDPAE--YASGVLQSISSPKLCLDRKDPSHGQPKLAPCSSDHVFPSPEQYW 488
            |:       |:||:||..:  ...|||::......|:|:.......|.|..|   |.:.....|:
Zfish   448 LE-------NVYPLLDRWDDILGYGVLKNDILKTHCIDQGPVPGSVPVLFGC---HYYGPQRCYY 502

  Fly   489 SLTNH---RELRSGFY----CLEVRNHGVNVHIYQCHGQSGNQF---WSF-------DSKTHQVI 536
            ..|..   ..::|..|    ||.....|..|.:|.|.......|   |.|       :.||::.|
Zfish   503 KRTGEIYVGSIKSHTYNSNRCLTDPGSGSTVTLYNCKYAKEKGFSIYWDFTQGKEIRNKKTNRCI 567

  Fly   537 ---SGQQQNFRHCLEAQPELNAVTSSVCDPKNHKQQWKFGYLNSQRLQHFWDNVK 588
               .||...:...|:|           |.    .|:|        .:||.::.:|
Zfish   568 ELAQGQDTYYYLVLQA-----------CT----GQEW--------TIQHAFEELK 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 pp-GalNAc-T 131..430 CDD:133004 117/315 (37%)
beta-trefoil_Ricin_Pgant8-like 445..573 CDD:467339 32/147 (22%)
galnt8a.2XP_073799092.1 None

Return to query results.
Submit another query.