DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and poc1bl

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001038243.2 Gene:poc1bl / 503760 ZFINID:ZDB-GENE-050306-41 Length:582 Species:Danio rerio


Alignment Length:606 Identity:186/606 - (30%)
Similarity:276/606 - (45%) Gaps:111/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RHKKKVLPLLLLMAIGSIIYYLYTLKLEGERDESATSTTSRLERDI--RDLQAVFESE------- 62
            |..:||..|..:..:.|:: :|:.|.:......|......|  |||  |||..:.|.|       
Zfish     4 RWSRKVAVLAKVCFLFSLL-WLFCLLIVRSSPPSLADNDGR--RDILARDLPPIEEEEEDSENLL 65

  Fly    63 ------VIPDL---GALGRPARGNWTEEQLEAIAKSQRETGYNAWLSKRISPERSLYDMRHRSCK 118
                  :.||.   |..||..|...|.|:.:....|......|.::|.:||..|.:.|.|...||
Zfish    66 RPVYEKLPPDSNAPGEYGRATRLTLTSEEKKEEEASVERCAINIFISDKISLHRHIQDNRMHECK 130

  Fly   119 KLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQA--DEKLNDFI 181
            ..||.:.:||:.||||.::||..|.||||:.|:...||..||:::|||||.|.:.  ..:|..:|
Zfish   131 AKKYNIRRLPTTSVVIAFYNEAWSTLLRTIHSVLETTPAVLLKDIILVDDFSDRGYLKSQLAQYI 195

  Fly   182 KIKFLNMVQHRRITT--QVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNRTC 244
            .    |:.:.|.|.|  :.||:.||::||..|...||.|||.|.|...||:|||:..|.|:..|.
Zfish   196 S----NLERVRLIRTKKREGLVRARLIGATYATGSVLTFLDCHCECVPGWIEPLLERIAENETTI 256

  Fly   245 TTPIIDTIDFDNFAY--RRGKPSRGFFNWE--FNYIQLPLL-KEEAVAMPAPHKNPIMNGGLFAI 304
            ..|:|||||::.|.:  :..:|..|.|:|.  |.:..:|.: ::...:...|.::|.|.|||||:
Zfish   257 ICPVIDTIDWNTFEFYMQTEEPMVGGFDWRLTFQWHAVPEIDRKIRKSRIDPIRSPTMAGGLFAV 321

  Fly   305 GREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSE 369
            .:.:|..||.||.|:::||.|..|||.::|.|||.:...|||.|||:|          .|.....
Zfish   322 SKAYFEYLGTYDMGMEVWGGENLELSFRVWQCGGSLEIHPCSHVGHVF----------PKKAPYA 376

  Fly   370 KKLISRNYRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDFL 434
            :....:|..|.||:|:|.||...:...|.......|:::|:..|:|||.||.|:|:|.       
Zfish   377 RSNFLQNTVRAAEVWMDTYKQHFYNRNPPARKESYGDISERIVLRNRLQCKSFEWYLQ------- 434

  Fly   435 NLYPILDPAEYA---SGVLQSISSPKLCLDRKDPSHGQPKLAPCSSDHVFPSPEQYWSLTNHREL 496
            |:||.|...|..   .|.::|......|||...|.|.             |:             
Zfish   435 NVYPGLHVPEDRPGWHGAVRSAGIHSECLDYNAPDHN-------------PT------------- 473

  Fly   497 RSGFYCLEVRNHGVNVHIYQCHGQSGNQFWSFDSKTHQVISGQQQNFRH------CLEAQPELNA 555
                        |.::.::.||||.|||::.:.|         |:..|.      |.|.|..:..
Zfish   474 ------------GAHLSLFGCHGQGGNQYFEYTS---------QREIRFNSVTELCAEVQDGMTH 517

  Fly   556 VTSSVCD----PKNHKQQWKF 572
            :....|.    ||.....|:|
Zfish   518 IGMKHCPQDGVPKPPSIIWQF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 115/307 (37%)
pp-GalNAc-T 131..430 CDD:133004 115/307 (37%)
Ricin_B_lectin 446..570 CDD:279046 25/136 (18%)
RICIN 448..572 CDD:238092 26/133 (20%)
poc1blNP_001038243.2 WcaA 139..434 CDD:223539 116/308 (38%)
pp-GalNAc-T 143..437 CDD:133004 116/314 (37%)
RICIN 451..581 CDD:238092 27/135 (20%)
Ricin_B_lectin 451..579 CDD:279046 27/135 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.