DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and Galntl5

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001020319.1 Gene:Galntl5 / 499968 RGDID:1565271 Length:443 Species:Rattus norvegicus


Alignment Length:444 Identity:155/444 - (34%)
Similarity:242/444 - (54%) Gaps:55/444 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KKVLPLLLLMAIGSIIYYLYTLKLEGERDESATSTTSRLERDIRDLQAVFESEVIPDLGALGRPA 74
            |:...||...:.|..:|            :.|:.:...|:.||.:.:|:|..   |:|       
  Rat    37 KETEKLLYNRSFGKNVY------------QQASHSKKILKGDIINDRAMFSD---PEL------- 79

  Fly    75 RGNWTEEQLEAIAKSQRETGYNAWLSKRISPERSLYDMRHRSCKKLKYPMEKLPSVSVVITYHNE 139
                    ::.:::    .|.|...|:|:..||.:.|.|::.|::..||. .||:.||:|.::||
  Rat    80 --------IQGLSR----YGLNVITSRRLGIERQVPDSRNKICQQKHYPF-NLPTASVIICFYNE 131

  Fly   140 EASVLLRTLSSLRSRTPIQLLREVILVDDGSTQAD--EKLNDFIKIKFLNMVQHRRITTQVGLMH 202
            |.:.||||:||:.:.:|..||.|:|||||.|...|  .||:..::| |...::..|...:.||:.
  Rat   132 EFNTLLRTVSSVMNLSPKHLLEEIILVDDMSEFDDLKAKLDYHLEI-FRGKIKLVRNKKREGLIR 195

  Fly   203 ARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNRTCTTPIIDTIDFDNFAYRRGKPSRG 267
            :|::||..|..|:|||||||.||.:.|||||:..|.:|::....|:||.||.....|......||
  Rat   196 SRMIGASRASGDILVFLDSHCEVNRVWLEPLLHAIAKDHKMVVCPVIDVIDELTLDYVGSPIVRG 260

  Fly   268 FFNWEFNYIQLPLLKEEAVAMPAPH---KNPIMNGGLFAIGREWFSELGGYDKGLKIWGAEQFEL 329
            .|:|..|:....:...|......|.   ::|.|:||:|||.|.:|:|||.|||.:.:||.|..||
  Rat   261 AFDWNLNFRWDDVFSYELDGPEGPSTPIRSPAMSGGIFAINRHYFNELGQYDKDMDLWGGENVEL 325

  Fly   330 SLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSEKKLISRNYRRVAEIWLDEYKDKLFA 394
            ||::|:||||:..:|||||||       ..:..:|::...:..:|:|..||..:||||||:..|.
  Rat   326 SLRIWMCGGQLFILPCSRVGH-------NNKALSKNRLVNQSALSKNLLRVVHVWLDEYKENFFL 383

  Fly   395 NMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDFLNLYPILDPAEYASG 448
            ..|.||.:..||::::.:|:.||.||.|:|:||       |::|.|:|.....|
  Rat   384 QRPSLTHVSCGNISDRVELRKRLGCKSFQWYLD-------NIFPELEPLNRGKG 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 123/303 (41%)
pp-GalNAc-T 131..430 CDD:133004 124/303 (41%)
Ricin_B_lectin 446..570 CDD:279046 1/3 (33%)
RICIN 448..572 CDD:238092 1/1 (100%)
Galntl5NP_001020319.1 pp-GalNAc-T 123..419 CDD:133004 125/310 (40%)
Glyco_tranf_2_3 123..355 CDD:290369 99/239 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346039
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.