DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant8 and Galntl6

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001129228.1 Gene:Galntl6 / 361142 RGDID:1564773 Length:601 Species:Rattus norvegicus


Alignment Length:626 Identity:220/626 - (35%)
Similarity:343/626 - (54%) Gaps:79/626 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RHKKKVLPLLLLMAIGSI------IYYLYT---LKLEGERDESAT-----------STTSRLER- 50
            |.:|:.|.:.||..:..|      ::.||.   |....|..|..|           |.|..|.| 
  Rat     3 RKQKRFLQMTLLFTVALIFLPNIGLWSLYKDKHLMKSAEPAEHQTFPLGLGDGQFYSWTDGLRRK 67

  Fly    51 DIRDLQAVFESEVIPDLGALGRPARGNWTEEQLEAIAKSQRETGYNAWLSKRISPERSLYDMRHR 115
            |..|..::.:..:....|..|:|.  ..|||..:..|  .||.|:|.::|..|:.||||.|:||.
  Rat    68 DWHDYVSIQKDALRSGKGEHGKPY--PLTEEDHDDSA--YRENGFNIFVSNNIALERSLPDIRHA 128

  Fly   116 SCKKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQ--ADEKLN 178
            :||...| :|:||:.|::|.:|||..:.||||:.|:.:|||..|:.|:|||||.|.:  ..:||.
  Rat   129 NCKHKMY-LERLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDFSDREHLKDKLE 192

  Fly   179 DFI-KIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNR 242
            |:: :...:.:|:.::   :.||:..|::||.:|..:||.|||||.||...||.||:..|..:::
  Rat   193 DYMARFPIVRIVRTKK---REGLIRTRLLGASVARGEVLTFLDSHCEVNVNWLPPLLNQIALNHK 254

  Fly   243 TCTTPIIDTIDFDNFAY--RRGKPSRGFFNWEFNYIQLPLLKEEAVAMPA-PHKNPIMNGGLFAI 304
            |...|:||.||..:|.|  :.|...||.|:||..|.::|:..|...|.|: |.::|:|.|||||:
  Rat   255 TIVCPMIDVIDHSHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQRADPSEPFESPVMAGGLFAV 319

  Fly   305 GREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSE 369
            .|:||.||||||.||:|||.||:|:|.|:|:|||::.:||||||||::|.   .:.|......| 
  Rat   320 DRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHIYRK---YVPYKVPSGTS- 380

  Fly   370 KKLISRNYRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDFL 434
               ::||.:||||.|:||:.:.::...|....:..|:::.|::|:.||.||.||||:..:|.|..
  Rat   381 ---LARNLKRVAETWMDEFAEYIYQRRPEYRHLSTGDISAQKELRKRLKCKDFKWFMAAVAWDVP 442

  Fly   435 NLYPILDPAEYASGVLQSISSPKLCLDRKDPSHG-QPKLAPCSSDHVFPSPEQYWSLTNHREL-- 496
            ..||.::|...|.|.:::::: .||:|.|..:.| :.:|..|..|    ..|:.||   |.:|  
  Rat   443 KYYPPVEPLPAAWGEIRNVAA-NLCVDSKHGAMGTELRLDICVKD----GSERTWS---HEQLFT 499

  Fly   497 -------RSG------FYCLEVRNHGVNVHIYQCHGQSGNQFWSF-DSKT--HQVISGQQQNFRH 545
                   |.|      .:||:..:|...|.:|.|||..|||.|.: :.:|  |.|.:.       
  Rat   500 FGWREDIRPGEPLHTRKFCLDAISHSSPVTLYDCHGMKGNQLWGYREDRTLFHPVSNS------- 557

  Fly   546 CLEAQPELNAVTSSVCDPKNHKQQWKFGYLNS---QRLQHF 583
            |::..|....|..:.|||.:..|||.|.::|.   :::.|:
  Rat   558 CMDCNPAEKKVFMARCDPLSETQQWMFEHINMTVLEKISHY 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 128/304 (42%)
pp-GalNAc-T 131..430 CDD:133004 127/304 (42%)
Ricin_B_lectin 446..570 CDD:279046 39/142 (27%)
RICIN 448..572 CDD:238092 40/142 (28%)
Galntl6NP_001129228.1 Glyco_tranf_2_3 140..365 CDD:290369 102/227 (45%)
pp-GalNAc-T 143..438 CDD:133004 127/304 (42%)
Ricin_B_lectin 454..582 CDD:279046 39/142 (27%)
RICIN 456..584 CDD:238092 40/142 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10175
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48703
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.030

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