DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant8 and Pgant2

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_608773.2 Gene:Pgant2 / 33556 FlyBaseID:FBgn0031530 Length:633 Species:Drosophila melanogaster


Alignment Length:601 Identity:193/601 - (32%)
Similarity:288/601 - (47%) Gaps:105/601 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LMAIGSIIYY----LYTLKLEGERDESATSTTSRLERDIRDLQAVFESEVIPDLGALGRP----- 73
            ::.|||:..:    ::.|||.|         ...||...:.|.           |..|.|     
  Fly    90 VILIGSVKDFERNAVHGLKLNG---------IVALEETSQGLS-----------GGTGGPGGRLP 134

  Fly    74 ----ARGNWTEEQLEA--IAKSQRETGYNAWLSKRISPE--------RSLYDMRHRSCKKLKYPM 124
                .||...|...||  |.......|.:.::..|.:.|        |.:.|.|:..|:..|| .
  Fly   135 VAPSGRGTEVEYFNEAGYIRAGALRNGEDPYIRNRFNQEASDALPSNRDIPDTRNPMCRTKKY-R 198

  Fly   125 EKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQADEKLNDFIKIKFLNMV 189
            |.||..||:||:|||..|.||||:.|:.:|:|..|:||::||||.|...::.| :..||..:.::
  Fly   199 EDLPETSVIITFHNEARSTLLRTIVSVLNRSPEHLIREIVLVDDYSDHPEDGL-ELAKIDKVRVI 262

  Fly   190 QHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNRTCTTPIIDTIDF 254
            ::.:   :.||:.:||.||:.|::.||.|||||||..:.|||||:..:.||......|:||.|..
  Fly   263 RNDK---REGLVRSRVKGADAAVSSVLTFLDSHVECNEMWLEPLLERVREDPTRVVCPVIDVISM 324

  Fly   255 DNFAYRRGKPS-RGFFNW----EFNYIQLPLLKEEAVAMPAPH---KNPIMNGGLFAIGREWFSE 311
            |||.|...... ||.|:|    ::.|:. |  .|.|:....|.   :.|::.||||.|.:.:|::
  Fly   325 DNFQYIGASADLRGGFDWNLIFKWEYLS-P--SERAMRHNDPTTAIRTPMIAGGLFVIDKAYFNK 386

  Fly   312 LGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSEKKLISRN 376
            ||.||..:.:||.|..|:|.::|.|||.:..:|||||||:||.     |:..........:.:||
  Fly   387 LGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK-----RHPYTFPGGSGNVFARN 446

  Fly   377 YRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDFLNLYPIL- 440
            .||.||:|:|:||...:..:|....||.||:.::..||.:||||||||:|:       |:||.| 
  Fly   447 TRRAAEVWMDDYKQHYYNAVPLAKNIPFGNIDDRLALKEKLHCKPFKWYLE-------NVYPDLQ 504

  Fly   441 --DPAEYASGVLQSISSPKLCLDRKDPSH---GQPKLAPCSSDHVFPSPEQYWSLTNHRELRSGF 500
              ||.|.  |..:..|:.  |||..  .|   |...:.||.:    ....|.|:.|...|::...
  Fly   505 APDPQEV--GQFRQDSTE--CLDTM--GHLIDGTVGIFPCHN----TGGNQEWAFTKRGEIKHDD 559

  Fly   501 YCLEVRN--HGVNVHIYQCHGQSGNQFWSFDSKTHQVISGQQQNFRH-----CLEAQPE-LNAVT 557
            .||.:..  .|..|.:..| ..|.||.|         |..:....||     ||:::.: ...|:
  Fly   560 LCLTLVTFARGSQVVLKAC-DDSENQRW---------IMREGGLVRHYKINVCLDSRDQSQQGVS 614

  Fly   558 SSVCDPKNHKQQWKFG 573
            :..|:.....|:|.||
  Fly   615 AQHCNSALGTQRWSFG 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 122/306 (40%)
pp-GalNAc-T 131..430 CDD:133004 122/306 (40%)
Ricin_B_lectin 446..570 CDD:279046 30/134 (22%)
RICIN 448..572 CDD:238092 31/134 (23%)
Pgant2NP_608773.2 WcaA 200..>432 CDD:223539 98/243 (40%)
pp-GalNAc-T 205..500 CDD:133004 123/313 (39%)
Ricin_B_lectin 511..627 CDD:279046 30/135 (22%)
RICIN 513..629 CDD:238092 30/133 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457051
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60373at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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