DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant8 and Galnt18

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001073353.1 Gene:Galnt18 / 293181 RGDID:1309623 Length:607 Species:Rattus norvegicus


Alignment Length:622 Identity:171/622 - (27%)
Similarity:290/622 - (46%) Gaps:136/622 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLLLMAIGSIIYYLYTLKLEGERDESATSTTSRLERDIRDLQAVFE---------SEVIPDLGAL 70
            ::.|:.:|.:..|:.::.:.|:.    .:...:||.|..|...:.|         .:.|.:..|.
  Rat    23 IICLLYVGWVTNYIASVYVRGQE----PAPDKKLEEDKGDTLKIIERLDHLENVIKQHIQEAPAK 83

  Fly    71 GRPAR----------GNWTEE---QLEAIAKSQ-RETGYNAWLSKRISPERSLYDMRHRSCKKLK 121
            ...|.          .:|.:|   :...:|..| :..||||:||.|:..:|.|.|:|...|:.|.
  Rat    84 PEEAEAEPFTDSSLFAHWGQELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLRPSGCRNLS 148

  Fly   122 YPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQAD--EKLNDFI--- 181
            :| :.||.||:|..:.||..|||||::.|...|||..||:|:|||||.|:..:  |||.:::   
  Rat   149 FP-DSLPEVSIVFIFVNEALSVLLRSIHSAMERTPSHLLKEIILVDDNSSNEELKEKLTEYVDKV 212

  Fly   182 ---KIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNRT 243
               |..|:.:|:|.:   |.||:.:||.|...|.|.|:...|:|||...||.||::..|.|:.:.
  Rat   213 NGQKPGFIKVVRHSK---QEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKR 274

  Fly   244 CTTPIIDTIDFDNFAYRRGKPSRGFFNWEF--NYIQLPLLKEEAVAMPAPHKNPIMNGGLFAIGR 306
            ..:|..|.|.:|||.......:...|:||.  .|:..|....:.....||.::|.:. |.|.:.|
  Rat   275 IISPSFDNIKYDNFEIEEYPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALI-GCFIVDR 338

  Fly   307 EWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSEKK 371
            ::|.|:|..|:|::::|.|..||.:::|.|||.:..:||||:.|:.|...   .|| :|..:.  
  Rat   339 QYFEEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHK---PYT-EDLTAH-- 397

  Fly   372 LISRNYRRVAEIWLDEYKDKLFA--NMPHL-TVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDF 433
             :.||..||||:|:||:|..::.  |:|.. :.|.:|::..::.|:.:|.||.|:|:|       
  Rat   398 -VRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTFRWYL------- 454

  Fly   434 LNLYPIL----DPAEYASGVLQSISSPKLCLDRKDPS---------HG----------------- 468
            :::||.:    |...|  ||||:.....||.|:...:         ||                 
  Rat   455 VSVYPEMRMYSDIIAY--GVLQNSLKTDLCFDQGPDTENVPIVYICHGMTPQNVYYTSSQQIHVG 517

  Fly   469 -------------------QPKLAPCSSDHVFPSPEQ---YW------SLTNHRELRSGFYCLEV 505
                               :|:|..||    :...::   :|      |:.|.:..|    |||:
  Rat   518 VLSPTIDDDDNRCLVDVNSRPRLIECS----YAKAKRMKLHWQFSQGGSIQNRKSKR----CLEL 574

  Fly   506 RNH-----GVNVHIYQCHGQSGNQFWSFDSKTHQVIS 537
            :.:     |..:.:.:|.|    |.|:..:....::|
  Rat   575 QENSDMEFGFQLVLQKCSG----QHWTITNVLRSLVS 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 109/311 (35%)
pp-GalNAc-T 131..430 CDD:133004 108/311 (35%)
Ricin_B_lectin 446..570 CDD:279046 26/151 (17%)
RICIN 448..572 CDD:238092 26/149 (17%)
Galnt18NP_001073353.1 pp-GalNAc-T 157..458 CDD:133004 108/318 (34%)
Ricin_B_lectin 469..596 CDD:279046 25/140 (18%)
RICIN 471..598 CDD:238092 25/138 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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