DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and Galnt5

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_766443.2 Gene:Galnt5 / 241391 MGIID:2179403 Length:930 Species:Mus musculus


Alignment Length:559 Identity:180/559 - (32%)
Similarity:280/559 - (50%) Gaps:96/559 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RDLQAVFESEVIPDLGALGRP----------ARGNWTEEQLEAIAKSQRETGYNAWLSKRISPER 107
            |||.|.         |..|||          |...|            :|..:|.:||..|..:|
Mouse   423 RDLNAP---------GQFGRPVVVPPEKKKEAEQRW------------KEGNFNVYLSDLIPVDR 466

  Fly   108 SLYDMRHRSCKKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQ 172
            ::.|.|...|.: :.....||:.|:::.:.:|..|.|||::.|:.:|:|..|::|::||||.||:
Mouse   467 AIEDTRPAGCAE-QLVHNDLPTTSIIMCFVDEVWSALLRSVHSVLNRSPPHLIKEILLVDDFSTK 530

  Fly   173 ------ADEKLNDFIKIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLE 231
                  .|:.::.|.|::.|      |:..:.||:.||:.||:.|..|||.|||||||...||||
Mouse   531 EYLKADLDKYMSQFPKVRIL------RLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLE 589

  Fly   232 PLIAPILEDNRTCTTPIIDTID--------FDNFAYRRGKPSRGFFNWEFNY----IQLPLLKEE 284
            ||:..:..:.:....|:|:.|:        .|||       .||.|.|..|:    |...::.:.
Mouse   590 PLLERVYLNRKKVACPVIEVINDKDMSYMTVDNF-------QRGVFTWPMNFGWKTIPPDVVAKN 647

  Fly   285 AVAMPAPHKNPIMNGGLFAIGREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVG 349
            .:......:.|:|.||||:|.:.:|.|||.||.||.:||.|..|||.|:|:|||:|..:||||||
Mouse   648 GIKETDIIRCPVMAGGLFSIDKSYFYELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVG 712

  Fly   350 HLFRDGNFQIRYT-NKDKNSEKKLISRNYRRVAEIWLDEYKDKLFANMPHL--TVIPVGNLAEQR 411
            |:||:.|   .|: .||:   .|.:.||..||||:|||:|::..:.:..||  ..:.||||.:||
Mouse   713 HIFRNDN---PYSFPKDR---MKTVERNLVRVAEVWLDDYRELFYGHGDHLIDQGLDVGNLTQQR 771

  Fly   412 DLKNRLHCKPFKWFLDNLATDFLNLYPILDPAEYASGVLQSISSPKLCLDRKDPSHGQPKLAPCS 476
            :|:.:|.||.|||:|||:..|      :..|...|||||.:::..| |:..::.:   ..|..|.
Mouse   772 ELRKKLKCKSFKWYLDNVFPD------LKAPVVRASGVLINMALGK-CVSIENIT---VTLEDCD 826

  Fly   477 SDHVFPSPEQYWSLTNHRELRSGFYCLEVRNHGVNVHIYQCHGQSGNQFWSFDSKT--------H 533
            ..    |..|.::.|..|.::.|.:|:.......::.:|.|..::....|...|.:        |
Mouse   827 GS----SQLQQFNYTWVRLIKHGEWCVAPIPEKGSLTLYHCDNRNNRLKWLHKSASAFHPELVDH 887

  Fly   534 QVISGQQQNFRHCLEAQPELNAVTSSVCDPKNHKQQWKF 572
            .|....||..  |:|.......:..:.|:|...:|:|||
Mouse   888 IVFENYQQLL--CMEGNFSQKTLKLAACNPMELQQKWKF 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 124/319 (39%)
pp-GalNAc-T 131..430 CDD:133004 126/319 (39%)
Ricin_B_lectin 446..570 CDD:279046 28/131 (21%)
RICIN 448..572 CDD:238092 27/131 (21%)
Galnt5NP_766443.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..381
Catalytic subdomain A 485..594 47/114 (41%)
pp-GalNAc-T 489..790 CDD:133004 126/319 (39%)
Catalytic subdomain B 654..716 34/61 (56%)
RICIN 805..925 CDD:214672 26/130 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.