DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant8 and gly-10

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_001041036.2 Gene:gly-10 / 178343 WormBaseID:WBGene00001635 Length:703 Species:Caenorhabditis elegans


Alignment Length:551 Identity:194/551 - (35%)
Similarity:301/551 - (54%) Gaps:49/551 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QAVFESEVIPDLGALGRPARGNW-------TEEQLEAIAKS-QRETGYNAWLSKRISPERSLYDM 112
            :|.:|.|       ..|...|.|       .::::|..|.| .:..||||::|..||..||:.|:
 Worm   166 EAAYEKE-------KRREGPGEWGKPVKLPEDKEVEKEALSLYKANGYNAYISDMISLNRSIKDI 223

  Fly   113 RHRSCKKLKYPMEKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQ--ADE 175
            ||:.||.:.| ..|||:|||:..:|.|..|.|||::.|:.:|:|.:||:|:|||||.|.:  ..:
 Worm   224 RHKECKNMMY-SAKLPTVSVIFPFHEEHNSTLLRSVYSVINRSPPELLKEIILVDDFSEKPALRQ 287

  Fly   176 KLNDFI-KIKFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILE 239
            .|.||: |.|..::|:..|...:.||:..|.:||:.|..::|:|||:|.|....||.||:.||.|
 Worm   288 PLEDFLKKNKIDHIVKVLRTKKREGLIRGRQLGAQDATGEILIFLDAHSEANYNWLPPLLDPIAE 352

  Fly   240 DNRTCTTPIIDTIDFDNFAYR-RGKPSRGFFNWEFNYIQLPLLKEEAVAMPAPHKNPIMNGGLFA 303
            |.||...|.:|.||.:.:..| :.:.:||.|:|.|||.:|||.|::..:...|..:|:|.||.||
 Worm   353 DYRTVVCPFVDVIDCETYEVRPQDEGARGSFDWAFNYKRLPLTKKDRESPTKPFNSPVMAGGYFA 417

  Fly   304 IGREWFSELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNS 368
            |..:||.||||||:||.|||.||:|||.|:|.|.|::::.|||||.|::|     .:|.......
 Worm   418 ISAKWFWELGGYDEGLDIWGGEQYELSFKVWQCHGRMVDAPCSRVAHIYR-----CKYAPFKNAG 477

  Fly   369 EKKLISRNYRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDF 433
            ....:||||:||||:|:|:||:.|:.:.|.:.....|:|...:.::.:|.||.|.||:..:|.|.
 Worm   478 MGDFVSRNYKRVAEVWMDDYKETLYKHRPGVGNADAGDLKLMKGIREKLQCKSFDWFMKEIAFDQ 542

  Fly   434 LNLYPILDPAEYASGVLQSISSPKLCLDRKDPSHGQP-KLAPCSSDHVFPSPEQYWSLTNHRELR 497
            ...||.::|...|.|.::::.: ..|:|.:.....|. .|..|:||......||...||...::|
 Worm   543 DKYYPAVEPKASAEGEIRNVGT-NFCIDTQFKEQNQRFGLRKCTSDDKDGGGEQDLRLTRWHDIR 606

  Fly   498 SG-----FYCLEVRNHGVN---VHIYQCHGQSGNQFWSFDSKTHQV---ISGQQQNFRHCLEAQP 551
            ..     |.|    :..|:   |.::.||...|||.:.:.....|:   ||||      ||.|..
 Worm   607 PKGRKICFDC----STSVDKAPVILFDCHSMKGNQLFKYRVAQKQIYHPISGQ------CLTADE 661

  Fly   552 E-LNAVTSSVCDPKNHKQQWKFGYLNSQRLQ 581
            . ...:....||..:..|:|.:..::::.|:
 Worm   662 NGKGFLHMKKCDSSSDLQKWAWQTVDNELLE 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 127/302 (42%)
pp-GalNAc-T 131..430 CDD:133004 125/302 (41%)
Ricin_B_lectin 446..570 CDD:279046 34/136 (25%)
RICIN 448..572 CDD:238092 34/136 (25%)
gly-10NP_001041036.2 pp-GalNAc-T 241..539 CDD:133004 125/302 (41%)
Ricin_B_lectin 555..681 CDD:279046 34/136 (25%)
RICIN 557..681 CDD:238092 33/134 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166012
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3364
OMA 1 1.010 - - QHG48703
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.910

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