DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgant8 and galntl6

DIOPT Version :9

Sequence 1:NP_648800.1 Gene:Pgant8 / 39715 FlyBaseID:FBgn0036529 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_031751315.1 Gene:galntl6 / 100487935 XenbaseID:XB-GENE-6042467 Length:600 Species:Xenopus tropicalis


Alignment Length:617 Identity:214/617 - (34%)
Similarity:336/617 - (54%) Gaps:83/617 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VLPLLLLMAIGSIIYYLYTLKLEGERDESA-----------------TSTTSRLERDIRDLQAVF 59
            ::.|:||..||     |:::..:.:..:||                 |.|.....:|..|.:::.
 Frog    16 MVTLILLPNIG-----LWSIYKDRQLMKSADAGDQPFSLGVSEAQLYTWTDGLRRKDWHDYESIQ 75

  Fly    60 ESEVIPDLGALGRPARGNWTEEQLEAIAKSQRETGYNAWLSKRISPERSLYDMRHRSCKKLKYPM 124
            :..:....|..|:|.  ..|||:.:...  .||.|:|.::|.:|:..|||.|:||.:||...| :
 Frog    76 KEALRSGKGEHGKPY--PLTEEEQDDTV--YRENGFNIFVSNKIALARSLPDIRHPNCKHKLY-L 135

  Fly   125 EKLPSVSVVITYHNEEASVLLRTLSSLRSRTPIQLLREVILVDDGSTQAD--EKLNDFI----KI 183
            |:||:.|::|.:|||..:.||||:.|:.:|||..|:.|:|||||.|.:..  |||.:::    |:
 Frog   136 ERLPNTSIIIPFHNEGWTSLLRTIHSVINRTPDSLIEEMILVDDFSDREHLREKLEEYMAYYPKV 200

  Fly   184 KFLNMVQHRRITTQVGLMHARVVGAELALADVLVFLDSHVEVTKGWLEPLIAPILEDNRTCTTPI 248
            :.:      |...:.||:..|::||.:|..:||.|||||.||...||.||:..|..:::|...|:
 Frog   201 RIV------RTKKREGLIRTRLLGASMAKGEVLTFLDSHCEVNVNWLPPLLNQIALNHKTIVCPM 259

  Fly   249 IDTIDFDNFAY--RRGKPSRGFFNWEFNYIQLPLLKEEAVAMPA-PHKNPIMNGGLFAIGREWFS 310
            ||.||.::|.|  :.|...||.|:||..|.::|:..|.....|: |.::|:|.|||||:.|:||.
 Frog   260 IDVIDHNHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQRTDPSEPFESPVMAGGLFAVDRKWFW 324

  Fly   311 ELGGYDKGLKIWGAEQFELSLKLWLCGGQILEVPCSRVGHLFRDGNFQIRYTNKDKNSEKKLISR 375
            ||||||.||:|||.||:|||.|:|:|||::.:||||||||::|.   .:.|......|    ::|
 Frog   325 ELGGYDPGLEIWGGEQYELSFKVWMCGGEMFDVPCSRVGHIYRK---YVPYKVPTGTS----LAR 382

  Fly   376 NYRRVAEIWLDEYKDKLFANMPHLTVIPVGNLAEQRDLKNRLHCKPFKWFLDNLATDFLNLYPIL 440
            |.:||||.|:|||.:.::...|....:..|:::.|::|:..|.||.|||::..:|.|....||.:
 Frog   383 NLKRVAETWMDEYAEYIYQRRPEYRHLSTGDISSQKELRKHLKCKDFKWYMSEVAWDVPKFYPPV 447

  Fly   441 DPAEYASGVLQSISSPKLCLDRKDPSHG-QPKLAPCSSDHVFPSPEQYWSLTNHREL-------- 496
            :|...:.|.:::::| .||:|.|..:.| :.:|..|..|    ..|:.||   |.:|        
 Frog   448 EPPPASWGEIRNVAS-NLCIDSKHGATGTELRLDTCVKD----GSERTWS---HEQLFTFGWRED 504

  Fly   497 -RSG------FYCLEVRNHGVNVHIYQCHGQSGNQFWSF-DSKT--HQVISGQQQNFRHCLEAQP 551
             |.|      .:|.:..:|...|.:|.|||..|||.||: ..||  |.|.:.       |::..|
 Frog   505 IRPGEPLHTRKFCFDSISHSSPVTLYDCHGMKGNQQWSYRKDKTLFHPVTNS-------CIDCNP 562

  Fly   552 ELNAVTSSVCDPKNHKQQWKFGYLNSQRLQHF 583
            ....:..:.|||.:..|||.|.::|...||.|
 Frog   563 AEKKLFMNRCDPLSETQQWIFEHVNMTILQKF 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant8NP_648800.1 GT2 128..427 CDD:224137 128/307 (42%)
pp-GalNAc-T 131..430 CDD:133004 127/307 (41%)
Ricin_B_lectin 446..570 CDD:279046 39/142 (27%)
RICIN 448..572 CDD:238092 41/142 (29%)
galntl6XP_031751315.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D144590at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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