DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7579 and gly-11

DIOPT Version :9

Sequence 1:NP_648799.1 Gene:CG7579 / 39714 FlyBaseID:FBgn0036528 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001022948.1 Gene:gly-11 / 176647 WormBaseID:WBGene00001636 Length:605 Species:Caenorhabditis elegans


Alignment Length:508 Identity:157/508 - (30%)
Similarity:236/508 - (46%) Gaps:83/508 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETDLV---------DAQLQN-EKYQYNAWLSERIPLKRTLEDYRDPQCLKINYSSEKTVTVSIVI 57
            :|||:         |.|::. :|||:|..||:||..:|.::|.|:.:|..:.| |:.....|||:
 Worm   102 DTDLLGKINGKAEDDLQVEGYKKYQFNGLLSDRIGSRRKIKDSRNARCSSLTY-SDSLPAASIVV 165

  Fly    58 AIQQEHPHTLLRGIYSVITQTSPYLLKEIVLVHDGHPDLDLI-RHIHHKLPIVIQ------LEME 115
            ....|.|..|:|.:.|:..:|.|..|.||:||.|.....:.. ..|.::...:||      |:.:
 Worm   166 CYFNESPSVLIRMVNSIFDRTKPEHLHEILLVDDSSEWSNATDEAIKYREKHIIQWEKVKFLKTD 230

  Fly   116 SSKGIIHARLTGAGVATGDILVFLNGHMEVTRGWLPPLLEPILLNNQTVTEPIVDAISRESFAYR 180
            .::|:|.|::.||..|.|::||||:.|.||...||||||:.|..|.:.|..||:|.|...:..| 
 Worm   231 KNEGLIRAKIFGARRANGEVLVFLDSHCEVNEEWLPPLLDQIKQNRRRVVCPIIDIIDAITMKY- 294

  Fly   181 KLVEPE--------QLAFDWQLDHIFLPLDQHSWNSLP----KPYPSSQLEGRVFAIDRKWFWHL 233
              ||..        .:.|.|...|       .|:...|    .|..|..:.|.:||||:::|:.:
 Worm   295 --VESPVCTGGVNWAMTFKWDYPH-------RSYFEDPMNYVNPLKSPTMAGGLFAIDKEYFFEI 350

  Fly   234 GGWDEGLRDYGGDALELSLKVWQCGGLILAVPCSRVGIIYKRDELEAQMAPNRNPSLQVQKNFKR 298
            |.:|||:..:|.:.:|:|:::|.|||.:|.:||||||.|::|..      |....:..:.||..|
 Worm   351 GSYDEGMDVWGAENVEISVRIWTCGGELLIMPCSRVGHIFRRQR------PYGIKTDSMGKNSVR 409

  Fly   299 VVDVWLDEYKLHFYRYNPKLRNLT-AESLDKPRDLRRRLNCKSFEWYRSQVAP---------QIR 353
            :..||||||..:|:...|..|..| ...|.....|||.|.||.|:||...:.|         |:.
 Worm   410 LARVWLDEYLENFFEARPNYRTFTDYGDLTSRISLRRNLQCKPFKWYLENIYPELLPDNTPNQLN 474

  Fly   354 NHFLHAGLTNYPIGKIMPFVAPHFCLSIK--------GGFPVIRKC-HSTNFEDWTLTSRCQLK- 408
            |..|.|| ..|    ::.......|||.:        |....:||| |....:.|..:|..:|: 
 Worm   475 NQILVAG-KKY----LIKMANGTHCLSAENSQGRIANGNRVEMRKCNHMERMQQWKYSSTNELRP 534

  Fly   409 --HGNMCLDVDYKNNVRATKCTKKLSKNPWHYNYQHSSFVSNGNKCLQIDVNK 459
              ...|||  |....:....|..:.:...|.        |||..|.....|||
 Worm   535 MGSSRMCL--DSLRGISVILCHNQGAHQMWQ--------VSNAGKLYSRSVNK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7579NP_648799.1 WcaA 52..336 CDD:223539 101/303 (33%)
pp-GalNAc-T 54..349 CDD:133004 107/314 (34%)
RICIN 367..478 CDD:238092 24/105 (23%)
Ricin_B_lectin 373..476 CDD:279046 24/99 (24%)
gly-11NP_001022948.1 pp-GalNAc-T 162..461 CDD:133004 107/314 (34%)
Glyco_tranf_2_3 162..392 CDD:290369 82/239 (34%)
RICIN 484..599 CDD:238092 25/108 (23%)
Ricin_B_lectin 486..602 CDD:279046 24/102 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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