DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7579 and Galnt6

DIOPT Version :9

Sequence 1:NP_648799.1 Gene:CG7579 / 39714 FlyBaseID:FBgn0036528 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001165534.1 Gene:Galnt6 / 100361647 RGDID:2319726 Length:622 Species:Rattus norvegicus


Alignment Length:542 Identity:157/542 - (28%)
Similarity:239/542 - (44%) Gaps:110/542 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETDLVDAQLQNEKYQ---YNAWLSERIPLKRTL-EDYRDPQCLKINY-SSEKTVTVSIVIAIQQE 62
            |..|::.|.::|.|:   :||:.|:||.|:|:| .|.|.|:|:...: ......|.|:||....|
  Rat   124 EWTLLETQEKDEGYKKHCFNAFASDRISLQRSLGPDTRPPECVDQKFRRCPPLPTTSVVIVFHNE 188

  Fly    63 HPHTLLRGIYSVITQTSPYLLKEIVLVHDGHPDLDLIRHIHHKLPIVIQ-------LEMESSKGI 120
            ...||||.:|||:..:...|||||:||.|...|    .|:..||...:|       :..:..||:
  Rat   189 AWSTLLRTVYSVLHTSPAILLKEIILVDDASTD----EHLKEKLERYVQQLQIVRVVRQQERKGL 249

  Fly   121 IHARLTGAGVATGDILVFLNGHMEVTRGWLPPLLEPILLNNQTVTEPIVDAISRESFAYRKLVEP 185
            |.|||.||.||..::|.||:.|.|...|||.|||..|..:...|..|.:..|...:|.:.|.:..
  Rat   250 ITARLLGASVAQAEVLTFLDAHCECFHGWLEPLLARIAEDKTAVVSPDIVTIDLNTFQFSKPMRR 314

  Fly   186 EQL----AFDWQLDHIFLPLDQHSWNSLPK-----------PYPSSQLEGRVFAIDRKWFWHLGG 235
            .:.    .|||.|        ...|..||:           |..|....|.:|:|.:.:|.|:|.
  Rat   315 GKAHSRGNFDWSL--------TFGWEMLPEHEKQRRKDETYPIKSPTFAGGLFSISKAYFEHIGT 371

  Fly   236 WDEGLRDYGGDALELSLKVWQCGGLILAVPCSRVGIIYKRDELEAQMAPNRNP--SLQVQKNFKR 298
            :|..:..:||:.:|:|.:||||||.:..:|||.||.:::      ..:|:..|  :..:.:|..|
  Rat   372 YDNQMEIWGGENVEMSFRVWQCGGQLEIIPCSVVGHVFR------TKSPHTFPKGTSVIARNQVR 430

  Fly   299 VVDVWLDEYKLHFYRYNPKLRNLTAESLDKPRD---------LRRRLNCKSFEWYRSQVAPQIRN 354
            :.:||:|:||..|||     |||.|..:.|..:         ||.:|:|.:|.||...|.|::  
  Rat   431 LAEVWMDDYKKIFYR-----RNLQAAKMAKENNFGDVSERLRLREQLHCHNFSWYLHNVYPEM-- 488

  Fly   355 HFLHAGLTNYPIGKIMPFVAPHF-----------CLSI----KGGFPVIR-KCHSTN----FEDW 399
                          .:|.:.|.|           ||.:    :||.|:|. .||:..    ||  
  Rat   489 --------------FVPDLNPTFSGAIKNLGTSQCLDVGENNRGGKPLIMYVCHNLGGNQYFE-- 537

  Fly   400 TLTSRCQLKHG---NMCLDVDYKN-NVRATKCTKKLSKNP----WHYNYQHSSFVSNGNKCLQID 456
             .||:..|:|.   .:||...... .:|..:...|.|:.|    |...............||...
  Rat   538 -YTSQRDLRHNIGKQLCLHASGSTLGLRNCQFIGKNSEVPKDEEWELTQDQLIRNLGSGTCLTSK 601

  Fly   457 VNKVGLILSACDSDVTEQRWMF 478
            ..|..  ::.|:.....|.|:|
  Rat   602 DKKPA--MAPCNPSDPYQLWLF 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7579NP_648799.1 WcaA 52..336 CDD:223539 102/316 (32%)
pp-GalNAc-T 54..349 CDD:133004 106/327 (32%)
RICIN 367..478 CDD:238092 30/138 (22%)
Ricin_B_lectin 373..476 CDD:279046 28/130 (22%)
Galnt6NP_001165534.1 pp-GalNAc-T 180..485 CDD:133004 106/327 (32%)
Ricin_B_lectin 497..619 CDD:395527 27/126 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346002
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.