DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7304 and CG10000

DIOPT Version :9

Sequence 1:NP_996098.1 Gene:CG7304 / 39713 FlyBaseID:FBgn0036527 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_651630.3 Gene:CG10000 / 43394 FlyBaseID:FBgn0039596 Length:558 Species:Drosophila melanogaster


Alignment Length:569 Identity:151/569 - (26%)
Similarity:236/569 - (41%) Gaps:139/569 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NCCFKYIVLPV--WIFIVLLLLHRDLSSWDGLMGPLSHPGLGENGSASYLSVPSWEIDEYTQGWR 71
            :|.|..|...:  ..|:|:.:.:.|.||.:.|:.     .:.|:..:.:|.            ||
  Fly    12 HCSFYIIAFLICQLFFLVIFIRNDDASSANELLS-----FMNESEESDHLD------------WR 59

  Fly    72 ------------YYLYNSWLAERIPLRRSLPDLRDHRCQKLEYDEDSDEMKPA------SIIMIF 118
                        :|.||..|:..:.|.|.||..|.|.|      ...:.:.||      |:::.|
  Fly    60 VFISHTPETSEDFYQYNIHLSNALGLIRKLPVTRHHSC------TTRNSILPAPLEANVSVVISF 118

  Fly   119 RNEQLVVLLRTLHSLVERTPK-YLYIELILVNDHSDTDF--------W-------NDKLSLIFFD 167
            .||...:||||:.||:.|:|: ||: |||||:|.|..|.        |       ..:|.|.|..
  Fly   119 HNEARSMLLRTIVSLLSRSPEDYLH-ELILVDDGSQRDVTLLDDLKRWMGGVFGSRYRLGLTFLR 182

  Fly   168 NYVHRYIHPKARILHLPEQVGLIKARNLAASEAKAENLVFVDAQVEFTNGWLSPLLDTIAEQSYT 232
            |               .|::|||.:||..||.|....::|:|:..|...|||.|||:.:|..:..
  Fly   183 N---------------QERMGLIWSRNRGASLASGRYVLFLDSHCEVNEGWLEPLLERLALNTNL 232

  Fly   233 LATPILDNLDEQTLAYQRSIE-RRGMYDWSLTRREVPLSRARRSHLPWPYEVAAVRTSVFAIPAV 296
            ..:|:||.:|..||:|::..| .:|.:||||....:......:..|..||:..|....|..:...
  Fly   233 AVSPLLDPIDPTTLSYRKGNELLKGGFDWSLHFHWLKRQLTNQESLEMPYQSPAFAGGVLMMSRE 297

  Fly   297 WFQDISNFDNNLRGFGAAELELSFKVWCTGGRIVQVPCSRVGH-----------------LQPKD 344
            ||..:.:|:..|:.:|...:||:.|:|..||:|..|||||:||                 |.|..
  Fly   298 WFLKLGSFNPYLKIWGGESIELAIKLWLCGGQIEIVPCSRIGHIFRRRHAFDFPPQSDRQLSPAQ 362

  Fly   345 EDYLKRYGDLHKMGEQKSRNLKRIIEVWTGDLKSAIYKYQPHLLNIS-EGDLNEPRKLYKQNECQ 408
            |.||              .|.|.|.|.|..:.|:..|..:|....|. :...:|.:::.|:..|.
  Fly   363 ETYL--------------HNSKIIAESWLDEYKNMFYALRPAARRIPLDHTYDELQRMRKERRCH 413

  Fly   409 SFKEFINDITPGLN-HVAALNRTDYASGHVKTLEFPKKCLTINAKSQNLFLERCSTNNTLQNWTL 472
            .|:.::..::|.|. |...|:.|.       ||....:|:....|.....|..|..::..| |::
  Fly   414 PFEWYLRHVSPELRMHFDELSATG-------TLRNEDRCVHARQKDSQPILASCYLSDITQ-WSM 470

  Fly   473 TYVKDLRVAG------NICAEVRPNLRLGYSFCHSLGGR-------QSW 508
                 ||.:|      .:|..|...:|:....|    ||       |.|
  Fly   471 -----LRQSGQLSTHRELCLAVGFGMRIALEPC----GRNETVRRSQRW 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7304NP_996098.1 WcaA 108..>231 CDD:223539 48/144 (33%)
pp-GalNAc-T 113..417 CDD:133004 101/338 (30%)
Ricin_B_lectin 433..546 CDD:279046 19/89 (21%)
RICIN 435..548 CDD:238092 19/87 (22%)
CG10000NP_651630.3 pp-GalNAc-T 113..422 CDD:133004 101/338 (30%)
Ricin_B_lectin 435..548 CDD:279046 20/93 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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