DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7304 and Galntl6

DIOPT Version :9

Sequence 1:NP_996098.1 Gene:CG7304 / 39713 FlyBaseID:FBgn0036527 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001129228.1 Gene:Galntl6 / 361142 RGDID:1564773 Length:601 Species:Rattus norvegicus


Alignment Length:573 Identity:175/573 - (30%)
Similarity:273/573 - (47%) Gaps:87/573 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SW-DGLMGPLSH-----------PGLGENGSASYLSVPSWEIDEYTQGWRYYLYNSWLAERIPLR 86
            || |||.....|           .|.||:|.    ..|..|.|.....:|...:|.:::..|.|.
  Rat    59 SWTDGLRRKDWHDYVSIQKDALRSGKGEHGK----PYPLTEEDHDDSAYRENGFNIFVSNNIALE 119

  Fly    87 RSLPDLRDHRCQKLEYDEDSDEMKPASIIMIFRNEQLVVLLRTLHSLVERTPKYLYIELILVNDH 151
            |||||:|...|:...|.|   .:...|||:.|.||....||||:||::.|||:.|..|:|||:|.
  Rat   120 RSLPDIRHANCKHKMYLE---RLPNTSIIIPFHNEGWTSLLRTIHSIINRTPESLIAEIILVDDF 181

  Fly   152 SDTDFWNDKLSLIFFDNYVHRYIHPKARILHLPEQVGLIKARNLAASEAKAENLVFVDAQVEFTN 216
            ||.:...|||     ::|:.|:  |..||:...::.|||:.|.|.||.|:.|.|.|:|:..|...
  Rat   182 SDREHLKDKL-----EDYMARF--PIVRIVRTKKREGLIRTRLLGASVARGEVLTFLDSHCEVNV 239

  Fly   217 GWLSPLLDTIAEQSYTLATPILDNLDEQTLAY--QRSIERRGMYDWSLTRREVP----LSRARRS 275
            .||.|||:.||....|:..|::|.:|.....|  |.....||.:||.:..:.:|    |.||..|
  Rat   240 NWLPPLLNQIALNHKTIVCPMIDVIDHSHFGYEAQAGDAMRGAFDWEMYYKRIPIPPELQRADPS 304

  Fly   276 HLPWPYEVAAVRTSVFAIPAVWFQDISNFDNNLRGFGAAELELSFKVWCTGGRIVQVPCSRVGHL 340
            .   |:|...:...:||:...||.::..:|..|..:|..:.|:|||||..||.:..||||||||:
  Rat   305 E---PFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGEMFDVPCSRVGHI 366

  Fly   341 QPKDEDYLKRYGDLHKM--GEQKSRNLKRIIEVWTGDLKSAIYKYQPHLLNISEGDLNEPRKLYK 403
            ..|...|        |:  |...:|||||:.|.|..:....||:.:|...::|.||::..::|.|
  Rat   367 YRKYVPY--------KVPSGTSLARNLKRVAETWMDEFAEYIYQRRPEYRHLSTGDISAQKELRK 423

  Fly   404 QNECQSFKEFINDIT-------PGLNHVAALNRTDYASGHVKTLEFPKKCLTI--NAKSQNLFLE 459
            :.:|:.||.|:..:.       |.:..:.|      |.|.::.:. ...|:..  .|....|.|:
  Rat   424 RLKCKDFKWFMAAVAWDVPKYYPPVEPLPA------AWGEIRNVA-ANLCVDSKHGAMGTELRLD 481

  Fly   460 RCSTNNTLQNW------TLTYVKDLRV-----AGNICAEVRPNLRLGYSF------CHSLGGRQS 507
            .|..:.:.:.|      |..:.:|:|.     ....|.:.     :.:|.      ||.:.|.|.
  Rat   482 ICVKDGSERTWSHEQLFTFGWREDIRPGEPLHTRKFCLDA-----ISHSSPVTLYDCHGMKGNQL 541

  Fly   508 WHY--DSVSNQLMSNTKCLEFTD-ELNIFLAICDAANGKQRWILDNINLSVMQ 557
            |.|  |......:||: |::... |..:|:|.||..:..|:|:.::||::|::
  Rat   542 WGYREDRTLFHPVSNS-CMDCNPAEKKVFMARCDPLSETQQWMFEHINMTVLE 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7304NP_996098.1 WcaA 108..>231 CDD:223539 51/122 (42%)
pp-GalNAc-T 113..417 CDD:133004 114/311 (37%)
Ricin_B_lectin 433..546 CDD:279046 29/134 (22%)
RICIN 435..548 CDD:238092 29/134 (22%)
Galntl6NP_001129228.1 Glyco_tranf_2_3 140..365 CDD:290369 89/234 (38%)
pp-GalNAc-T 143..438 CDD:133004 114/312 (37%)
Ricin_B_lectin 454..582 CDD:279046 29/134 (22%)
RICIN 456..584 CDD:238092 29/134 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276134at2759
OrthoFinder 1 1.000 - - FOG0001284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11675
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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