DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7304 and Pgant7

DIOPT Version :9

Sequence 1:NP_996098.1 Gene:CG7304 / 39713 FlyBaseID:FBgn0036527 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001285406.1 Gene:Pgant7 / 32836 FlyBaseID:FBgn0030930 Length:591 Species:Drosophila melanogaster


Alignment Length:539 Identity:154/539 - (28%)
Similarity:233/539 - (43%) Gaps:113/539 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DGL-------MGPLSHPGLGENGSASYLSVPSWEIDEYTQGWRYYLYNSWLAERIPLRRSLPDLR 93
            |||       :.|.|.|  ||||.|..||.....:.:.::  ..|..|...::.|.:.||:.|.|
  Fly    68 DGLGNFEPKDVKPRSGP--GENGEAHSLSPDKKHMSDASE--MEYGMNIACSDEISMHRSVRDTR 128

  Fly    94 DHRCQKLEYDEDSDEMKPASIIMIFRNEQLVVLLRTLHSLVERTPKYLYIELILVNDHSDTDFWN 158
            ...|:..:|..|   :...|:|::|.||...||:||:||:::|:|.::..|:|||:|.||.:...
  Fly   129 LEECRHWDYPFD---LPRTSVIIVFHNEGFSVLMRTVHSVIDRSPTHMLHEIILVDDFSDKENLR 190

  Fly   159 DKLSLIFFDNYVHRYIHPKARILHLPEQVGLIKARNLAASEAKAENLVFVDAQVEFTNGWLSPLL 223
            .:|     |.||.:: ....:::...|:.|||:.|:..|.||..|.:||:||..|....||.|||
  Fly   191 SQL-----DEYVLQF-KGLVKVIRNKEREGLIRTRSRGAMEATGEVIVFLDAHCEVNTNWLPPLL 249

  Fly   224 DTIAEQSYTLATPILDNLDEQTLAYQ----RSIERRGMYDWSLTRREVPLSR---ARRSHLPWPY 281
            ..|......:..||:|.:|.:...|:    .....||:::|.:..:|..:.|   .||:|...||
  Fly   250 APIYRDRTVMTVPIIDGIDHKNFEYRPVYGTDNHFRGIFEWGMLYKENEVPRREQRRRAHNSEPY 314

  Fly   282 EVAAVRTSVFAIPAVWFQDISNFDNNLRGFGAAELELSFKVWCTGGRIVQVPCSRVGHLQPKDED 346
            ........:|||...:|.::..:|..|..:|....|||||:|..||.|..||||||||:......
  Fly   315 RSPTHAGGLFAINREYFLELGAYDPGLLVWGGENFELSFKIWQCGGSIEWVPCSRVGHVYRGFMP 379

  Fly   347 YLKRYGDL--HKMGEQKSRNLKRIIEVWTGDL-KSAIYKYQPHLLNISEGDLNEPRKLYKQNECQ 408
            |  .:|.|  .|.|...:.|.||:||.|..|. |...|..:|....:..||::|...|.|:..|:
  Fly   380 Y--NFGKLASKKKGPLITINYKRVIETWFDDTHKEYFYTREPLARYLDMGDISEQLALKKRLNCK 442

  Fly   409 SFKEFINDIT-------PGL---------------------------------------NHVAAL 427
            ||:.|::.|.       |||                                       |.:..|
  Fly   443 SFQWFMDHIAYDVYDKFPGLPANLHWGELRSVASDGCLDSMGHQPPAIMGLTYCHGGGNNQLVRL 507

  Fly   428 N------------------------RTDYASG------HVKTL--EFPKKCLTINAKSQNLFLER 460
            |                        |.....|      |.|.|  ...|||:.::..:|.|.|..
  Fly   508 NAAGQLGVGERCVEADRQGIKLAVCRLGTVDGPWQYNEHTKHLMHRVHKKCMALHPATQQLSLGH 572

  Fly   461 CSTNNTLQNWTLTYVKDLR 479
            |..|::.|.|   :.|::|
  Fly   573 CDVNDSYQQW---WFKEIR 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7304NP_996098.1 WcaA 108..>231 CDD:223539 44/122 (36%)
pp-GalNAc-T 113..417 CDD:133004 107/313 (34%)
Ricin_B_lectin 433..546 CDD:279046 16/55 (29%)
RICIN 435..548 CDD:238092 16/53 (30%)
Pgant7NP_001285406.1 Glyco_tranf_2_3 142..373 CDD:290369 82/236 (35%)
pp-GalNAc-T 145..452 CDD:133004 107/314 (34%)
Ricin_B_lectin 468..582 CDD:279046 17/113 (15%)
RICIN 469..584 CDD:238092 18/117 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457032
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11675
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.