DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7304 and Galnt2

DIOPT Version :9

Sequence 1:NP_996098.1 Gene:CG7304 / 39713 FlyBaseID:FBgn0036527 Length:563 Species:Drosophila melanogaster
Sequence 2:XP_038953584.1 Gene:Galnt2 / 292090 RGDID:1310692 Length:570 Species:Rattus norvegicus


Alignment Length:507 Identity:137/507 - (27%)
Similarity:236/507 - (46%) Gaps:63/507 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YNSWLAERIPLRRSLPDLRDHRCQKLEYDEDSDEMKPASIIMIFRNEQLVVLLRTLHSLVERTPK 139
            :|...::::.:.||:||.|..:||:.::..|   :...|:::.|.||....||||:.|:::|:|.
  Rat   103 FNQVESDKLRMDRSIPDTRHDQCQRKQWRVD---LPATSVVITFHNEARSALLRTVVSVLKRSPP 164

  Fly   140 YLYIELILVNDHSDTDFWNDKLSLIFFDNYVHRYIHPKARILHLPEQVGLIKARNLAASEAKAEN 204
            :|..|:|||:|:|:.......|..|           .|.|:|....:.||:::|...|..|:|:.
  Rat   165 HLIKEIILVDDYSNDPEDGALLGKI-----------EKVRVLRNDRREGLMRSRVRGADAAQAKV 218

  Fly   205 LVFVDAQVEFTNGWLSPLLDTIAEQSYTLATPILDNLDEQTLAY-QRSIERRGMYDWSLTRR--- 265
            |.|:|:..|....||.|||:.:||....:.:||:|.::.....| ..|.:.:|.:||:|..:   
  Rat   219 LTFLDSHCECNERWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDY 283

  Fly   266 EVPLSRARRSHLPWPYEVAAVRT-----SVFAIPAVWFQDISNFDNNLRGFGAAELELSFKVWCT 325
            ..|..|..|...|    ||.::|     .:|.:..::|:::..:|..:..:|...||:||:||..
  Rat   284 MTPEQRRSRQGNP----VAPIKTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQC 344

  Fly   326 GGRIVQVPCSRVGHLQPKDEDYLKRYGDLHKMGEQKSRNLKRIIEVWTGDLKSAIYKYQPHLLNI 390
            ||.:..:|||||||:..|...|....|.    |...:||.:|..|||..:.|...|...|...|:
  Rat   345 GGSLEIIPCSRVGHVFRKQHPYTFPGGS----GTVFARNTRRAAEVWMDEFKHFYYAAVPSARNV 405

  Fly   391 SEGDLNEPRKLYKQNECQSFKEFINDITPGLNHVAALNRTDYASGHVKTLEFPKKCL-TINAKSQ 454
            ..|::....:|.|:..|:.||.:::::.|.|.   ..:..|.|.|   .|:....|| |:...:.
  Rat   406 PYGNIQSRLELRKKLGCKPFKWYLDNVYPELR---VPDHQDIAFG---ALQQGTNCLDTLGHFAD 464

  Fly   455 NLF-LERCSTNNTLQNWTLTYVKDLRVAGNICAEV---RPNLRLGYSFCHSLGGRQSWHYDSVSN 515
            .:. :..|......|.|.||..|.::.. ::|..|   .|...:....|.....||.|      .
  Rat   465 GVVGIYECHNAGGNQEWALTKEKSVKHM-DLCLTVVDRSPGSLIRLQGCRENDSRQKW------E 522

  Fly   516 QLMSNTK--------CLEFTDELN--IFLAICDAANGKQRWILDNINLSVMQ 557
            |:..|:|        ||:.....:  :.:.:|..|. .|:|   ..:|::.|
  Rat   523 QIEGNSKLRHVGSNLCLDSRTAKSGGLSVEVCGPAL-SQQW---KFSLNLQQ 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7304NP_996098.1 WcaA 108..>231 CDD:223539 40/122 (33%)
pp-GalNAc-T 113..417 CDD:133004 95/312 (30%)
Ricin_B_lectin 433..546 CDD:279046 27/127 (21%)
RICIN 435..548 CDD:238092 27/127 (21%)
Galnt2XP_038953584.1 pp-GalNAc-T 138..433 CDD:133004 95/313 (30%)
Ricin_B_lectin 445..562 CDD:395527 27/127 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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