DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and zic2b

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001001820.1 Gene:zic2b / 570746 ZFINID:ZDB-GENE-030219-92 Length:427 Species:Danio rerio


Alignment Length:352 Identity:87/352 - (24%)
Similarity:137/352 - (38%) Gaps:84/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 SSATISPHNSSTDESFTSIKRESSEE---------------SQH----NGIGGIHTCNFCGKTFK 639
            |:|.:..|.::...||.|....|:.|               .||    :..|.:|..:..|:...
Zfish    66 SAAALGAHAAAHAASFASSTFNSTREFLLRSRGFGDSTPASGQHPIFSSTSGSLHHSHPEGQGHL 130

  Fly   640 RFSRMQDHLRLHTGEKPYVCGQCG------------------RA-------FRLKMRLVEHQ--- 676
            .|..:.:....|.|....:.|:.|                  ||       ..:.|.:..|.   
Zfish   131 LFPGIHEQHGSHHGSPNILNGRLGLPGEVFGRTEQYHQVPNTRADPYSQYGLNMSMNMAHHPGAF 195

  Fly   677 LRHRAEKAYKCDI----------------CSMPLATKQDLSLHM--RHHKNDRR-------YKCD 716
            .|:..::..|.::                ||...:|..:|..|:  .|.....:       .:|.
Zfish   196 FRYMRQQCIKQELICKWIDPEQLGDPKKCCSKTFSTMHELVTHVSTEHVGGPEQCNHICFWEECP 260

  Fly   717 KCNKGFVRSSDLSIHVRIHTGEKPYSCDL--CGKAFRARQNLVVHRRTHLGDKPIQCEL--CDKR 777
            :.:|.|.....|..|:|:||||||::|..  |||.|...:||.:|:|||.|:||..||.  ||:|
Zfish   261 RESKPFKAKYKLVNHIRVHTGEKPFACPFPGCGKVFARSENLKIHKRTHTGEKPFLCEFEGCDRR 325

  Fly   778 FARKIDMRVHMRRHTGEKPYNCDACQRGYSSRVNLLRHQEREHGIEEQVPGSGQADKKHTKTATE 842
            ||...|.:.||..||.:|||.|..|.:.|:...:|.:|. :.|  |:|.|   .||.  :...:.
Zfish   326 FANSSDRKKHMHVHTSDKPYLCKLCDKSYTHPSSLRKHM-KVH--EDQAP---IADS--SPAGSS 382

  Fly   843 NEQENEPKAKAAPRRPRREKLQQKIAA 869
            ..:.:.|.:..:|.......|....||
Zfish   383 GYESSTPSSLISPCSETHSTLSPDSAA 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 64/268 (24%)
C2H2 Zn finger 631..651 CDD:275368 2/19 (11%)
C2H2 Zn finger 715..735 CDD:275368 6/19 (32%)
C2H2 Zn finger 743..763 CDD:275368 9/21 (43%)
C2H2 Zn finger 771..791 CDD:275368 10/21 (48%)
zf-H2C2_2 783..808 CDD:463886 11/24 (46%)
C2H2 Zn finger 799..816 CDD:275370 4/16 (25%)
zic2bNP_001001820.1 zf_ZIC 202..247 CDD:436441 7/44 (16%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
SFP1 <281..365 CDD:227516 38/84 (45%)
C2H2 Zn finger 290..309 CDD:275368 8/18 (44%)
C2H2 Zn finger 317..339 CDD:275368 10/21 (48%)
C2H2 Zn finger 347..367 CDD:275368 5/20 (25%)

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