DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and Zfp560

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001004190.2 Gene:Zfp560 / 434377 MGIID:1915280 Length:754 Species:Mus musculus


Alignment Length:193 Identity:85/193 - (44%)
Similarity:112/193 - (58%) Gaps:6/193 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 HT------CNFCGKTFKRFSRMQDHLRLHTGEKPYVCGQCGRAFRLKMRLVEHQLRHRAEKAYKC 687
            ||      ||.|||.|...|.:.:|:|.|||||||||.:||:||.:...|.:|...|..||.:||
Mouse   497 HTGENPFECNMCGKAFACSSYLHNHIRTHTGEKPYVCKECGKAFTVSSHLSKHVRIHTGEKPHKC 561

  Fly   688 DICSMPLATKQDLSLHMRHHKNDRRYKCDKCNKGFVRSSDLSIHVRIHTGEKPYSCDLCGKAFRA 752
            :.|......:..|:.|:|.|..::.|.|.:|.|.|..||.|..|.|.|||||||.||.|||||.:
Mouse   562 EECGKAFTVRSGLTKHIRTHTGEKPYNCKECGKAFTTSSGLLEHKRSHTGEKPYECDQCGKAFAS 626

  Fly   753 RQNLVVHRRTHLGDKPIQCELCDKRFARKIDMRVHMRRHTGEKPYNCDACQRGYSSRVNLLRH 815
            ...|:.|.|.|.|:||.:|..|.|.|.....:.:|||.|||||||:|..|.:.::...:|.:|
Mouse   627 SSYLIAHLRIHTGEKPFECNECGKAFTCSSYLHIHMRTHTGEKPYDCKECGKTFAVYSHLSKH 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 71/163 (44%)
C2H2 Zn finger 631..651 CDD:275368 9/19 (47%)
C2H2 Zn finger 715..735 CDD:275368 9/19 (47%)
C2H2 Zn finger 743..763 CDD:275368 10/19 (53%)
C2H2 Zn finger 771..791 CDD:275368 7/19 (37%)
zf-H2C2_2 783..808 CDD:463886 12/24 (50%)
C2H2 Zn finger 799..816 CDD:275370 4/17 (24%)
Zfp560NP_001004190.2 KRAB 41..97 CDD:214630
COG5048 276..689 CDD:227381 84/191 (44%)
C2H2 Zn finger 281..301 CDD:275368
C2H2 Zn finger 309..329 CDD:275368
C2H2 Zn finger 337..357 CDD:275368
C2H2 Zn finger 365..385 CDD:275368
C2H2 Zn finger 393..413 CDD:275368
C2H2 Zn finger 421..441 CDD:275368
C2H2 Zn finger 449..469 CDD:275368
C2H2 Zn finger 477..497 CDD:275368 85/193 (44%)
C2H2 Zn finger 505..525 CDD:275368 9/19 (47%)
C2H2 Zn finger 533..553 CDD:275368 7/19 (37%)
C2H2 Zn finger 561..581 CDD:275368 5/19 (26%)
C2H2 Zn finger 589..609 CDD:275368 9/19 (47%)
C2H2 Zn finger 617..637 CDD:275368 10/19 (53%)
C2H2 Zn finger 645..665 CDD:275368 7/19 (37%)
C2H2 Zn finger 673..693 CDD:275368 4/17 (24%)
C2H2 Zn finger 701..718 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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