DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and CG4360

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_650879.1 Gene:CG4360 / 42413 FlyBaseID:FBgn0038787 Length:556 Species:Drosophila melanogaster


Alignment Length:599 Identity:111/599 - (18%)
Similarity:171/599 - (28%) Gaps:274/599 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   441 HLENAETNSKDNTESVALKETIHDKQLTIDEAG--------------KAGTQKDDNSNQKQLDKS 491
            ||.:|       |.:.|........||.....|              ..|:....||.|:| ..:
  Fly     2 HLNHA-------TAATAAMANYQHYQLPASHGGGGGGGGGGGGGGGSNGGSGPGPNSGQQQ-PTT 58

  Fly   492 EANAGKSKMVDQVHQQMPVESAK--DHQQM--TEEP------TNSTKRKRGRKERKSPTPVLIPL 546
            .|:..:|...  :||...|::.:  .||.|  .:.|      .::|....|.....|.||: .|:
  Fly    59 LASLQQSPFA--LHQLTAVQAIQHPTHQAMLHPQHPLVHLLDISTTTANSGGGGGGSHTPI-SPM 120

  Fly   547 GDKEIKEEPELPERRMRKSRQHVDYVVEIKDEEEDDDEVEEAEVDDDSSATISPHNSSTDESFTS 611
                               :|.|..|:          ..||..|||...........:.....|:
  Fly   121 -------------------KQEVQSVI----------SEEEVVVDDPRKKKQCHVCKNKFRQLTT 156

  Fly   612 IKRESSEESQHNGIGGIHT------CNFCGKTFKRFSRMQDHLRLHTGEKPYVCGQCGRAFRLKM 670
            ::....          |||      |..|.|.|::.|.:.:|:::||||||:.|..|.:.||.:.
  Fly   157 LRNHMK----------IHTDERPYKCKHCDKAFRQISTLTNHVKIHTGEKPFTCNICAKDFRQQS 211

  Fly   671 RLVEHQLRHRAE----------------------------------------------------- 682
            .|:.|...|:|.                                                     
  Fly   212 TLINHIKTHKAAESSTPTSLLNYQPQTGSGKHRKSQMHQAYQQQHQRVQISKTLYSGSYSSPAAE 276

  Fly   683 ---KAYKCDICSMPLATKQDLSLHMRHHKNDRRYKCDKCNKGFVRSSDLSIHVRIHTGEKPYSCD 744
               |.::|.:|.........|..|.|.|.:.:.|||:.|:|.|.:.:.|:.|.:||||:|||:|.
  Fly   277 ELVKPFQCSVCKRRFPQLSTLHNHERTHIDPKPYKCETCDKSFSQLATLANHKKIHTGDKPYTCS 341

  Fly   745 LCGKAFR---------------------------------------------------------- 751
            .|...||                                                          
  Fly   342 YCHMQFRQQSTLTNHLKTHTHQIAPGGVGGAGGGGGAVTATVDHSMPAPLAPGTQQLTSGLLPNN 406

  Fly   752 ----------------------------------------------------------------- 751
                                                                             
  Fly   407 LHGSTANIIQLDHHPLLHFLDGSTTVSSVVATAAANTKVEHFQAGGSPSGRMTVVGTINMLKGDN 471

  Fly   752 ---------------ARQNLVVHRRTHLGDKPIQCELCDKRFARKIDMRVHMRRHTGEKPYNCDA 801
                           .:..||.|.:||.|:||.:|::|:..|.:...:..||:.|||||||||..
  Fly   472 PDRPFGCSVCQRFFSQQSTLVNHIKTHTGEKPYKCKICEVNFRQVATLNNHMKIHTGEKPYNCSF 536

  Fly   802 CQRGYSSRVNLLRH 815
            |.:.:..:..|..|
  Fly   537 CPKQFRQKSTLQNH 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 61/392 (16%)
C2H2 Zn finger 631..651 CDD:275368 6/19 (32%)
C2H2 Zn finger 715..735 CDD:275368 6/19 (32%)
C2H2 Zn finger 743..763 CDD:275368 7/157 (4%)
C2H2 Zn finger 771..791 CDD:275368 5/19 (26%)
zf-H2C2_2 783..808 CDD:463886 12/24 (50%)
C2H2 Zn finger 799..816 CDD:275370 4/17 (24%)
CG4360NP_650879.1 C2H2 Zn finger 144..164 CDD:275368 1/29 (3%)
zf-H2C2_2 157..181 CDD:463886 7/33 (21%)
C2H2 Zn finger 172..192 CDD:275368 6/19 (32%)
C2H2 Zn finger 200..220 CDD:275368 6/19 (32%)
zf-C2H2_8 281..366 CDD:464935 25/84 (30%)
C2H2 Zn finger 284..304 CDD:275368 5/19 (26%)
C2H2 Zn finger 312..332 CDD:275368 6/19 (32%)
zf-H2C2_2 325..349 CDD:463886 12/23 (52%)
C2H2 Zn finger 340..360 CDD:275368 4/19 (21%)
C2H2 Zn finger 478..498 CDD:275368 3/19 (16%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
zf-H2C2_2 519..543 CDD:463886 12/23 (52%)
C2H2 Zn finger 534..554 CDD:275368 4/17 (24%)

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