DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and zic6

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001001837.1 Gene:zic6 / 415097 ZFINID:ZDB-GENE-061207-1 Length:525 Species:Danio rerio


Alignment Length:259 Identity:74/259 - (28%)
Similarity:107/259 - (41%) Gaps:62/259 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   635 GKTFKRFSRMQDHLRL---------HTGEKPYVCGQCGRAFRLKMRLVEH-QLRHRAEKAYKCDI 689
            |..|.|.||......|         .||:.|     |.|:|.....||.| .:.|.....:...:
Zfish   204 GDAFLRCSRQNPKHELVCKWSDGQEGTGKPP-----CARSFGTMYELVTHVTVEHVGGPEHSDYV 263

  Fly   690 CSMPLATKQDLSLHMRHHKNDRRYKCDKCNKGFVRSSDLSIHVRIHTGEKPYSCDL--CGKAFRA 752
            |               |.:|     |.:..|.|.....|..|||:||||||:.|..  |.|.|..
Zfish   264 C---------------HWEN-----CPRDRKPFKAKYKLVNHVRVHTGEKPFPCPFHGCEKVFAR 308

  Fly   753 RQNLVVHRRTHLGDKPIQCEL--CDKRFARKIDMRVHMRRHTGEKPYNCD--ACQRGYSSRVNLL 813
            .:||.:|:|||.|:||.:||.  |::|||...|.:.|...|:.:|||.|.  .|::.|:...:|.
Zfish   309 SENLKIHKRTHTGEKPFKCEFEGCNRRFANSSDRKKHSHVHSSDKPYTCKVRGCEKCYTHPSSLR 373

  Fly   814 RH-------------QEREHGIEEQVPGSGQ-----ADKKHTKTATENEQEN---EPKAKAAPR 856
            :|             ::.||.:|.:.|...:     |....|:|.|....|.   |.:.::|.|
Zfish   374 KHMKLHCKAYIAKIGEDDEHLVEARSPEVTEHQDTPASTTVTRTMTTPSHETLSPETRNESAVR 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 52/165 (32%)
C2H2 Zn finger 631..651 CDD:275368 6/24 (25%)
C2H2 Zn finger 715..735 CDD:275368 7/19 (37%)
C2H2 Zn finger 743..763 CDD:275368 8/21 (38%)
C2H2 Zn finger 771..791 CDD:275368 8/21 (38%)
zf-H2C2_2 783..808 CDD:463886 9/26 (35%)
C2H2 Zn finger 799..816 CDD:275370 5/31 (16%)
zic6NP_001001837.1 zf_ZIC 213..257 CDD:436441 11/48 (23%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
SFP1 <291..377 CDD:227516 34/85 (40%)
C2H2 Zn finger 297..319 CDD:275368 8/21 (38%)
C2H2 Zn finger 327..349 CDD:275368 8/21 (38%)
C2H2 Zn finger 357..379 CDD:275368 5/21 (24%)

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