DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and zic5

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_991290.1 Gene:zic5 / 403041 ZFINID:ZDB-GENE-040622-1 Length:497 Species:Danio rerio


Alignment Length:341 Identity:83/341 - (24%)
Similarity:121/341 - (35%) Gaps:90/341 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   621 QHNGIGGIHTCNFC-----------GKT--FKRFSRMQDHLRL--------HTGEKPYVCGQCGR 664
            :|.|...:|:.|..           |.|  |.|:.|......|        .|.:||     |.:
Zfish   207 EHYGSSSLHSYNSMNLNVNLATAPHGATGAFLRYMRQPIKQELICKWIDQEQTAKKP-----CSK 266

  Fly   665 AFRLKMRLVEH-QLRHRAEKAYKCDICSMPLATKQDLSLHMRHHKNDRRYKCDKCNKGFVRSSDL 728
            .|.....||.| .:.|.........:|...                    :|.:..|.|.....|
Zfish   267 TFSTMHELVNHVTVEHVGGPEQSTHVCFWE--------------------ECPREGKAFKAKYKL 311

  Fly   729 SIHVRIHTGEKPYSCDL--CGKAFRARQNLVVHRRTHLGDKPIQCEL--CDKRFARKIDMRVHMR 789
            ..|:|:||||||:.|..  |||.|...:||.:|:|||.|:||.:||.  ||::||...|.:.|..
Zfish   312 INHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFKCEFDGCDRKFANSSDRKKHSH 376

  Fly   790 RHTGEKPYNCD--ACQRGYSSRVNLLRHQEREHGIEEQVPGSGQADKKHTKTATENEQENEPKAK 852
            .||.:|||.|.  .|.:.|:...:|.:|. :.|......|.:......|..:.|..:      |.
Zfish   377 VHTSDKPYFCKVRGCDKSYTHPSSLRKHM-KVHCKSPPPPSANTGSSYHPSSTTIGD------AL 434

  Fly   853 AAPRRPRREKLQQKIAAQEKLLNDLKRSLSAMPEIPEESAQVKLDGSGQDIPADAGAGHAQVQVT 917
            :....|.|                 .||.:..|::...:......||       ||..:      
Zfish   435 SPNLDPHR-----------------NRSSNLSPQVTNLNEWYVCQGS-------AGPNN------ 469

  Fly   918 LSMQMEPAPNTEDDEE 933
            |.......|.:|.|:|
Zfish   470 LHTPSSDVPTSESDDE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 53/191 (28%)
C2H2 Zn finger 631..651 CDD:275368 7/40 (18%)
C2H2 Zn finger 715..735 CDD:275368 6/19 (32%)
C2H2 Zn finger 743..763 CDD:275368 9/21 (43%)
C2H2 Zn finger 771..791 CDD:275368 8/21 (38%)
zf-H2C2_2 783..808 CDD:463886 10/26 (38%)
C2H2 Zn finger 799..816 CDD:275370 4/18 (22%)
zic5NP_991290.1 zf_ZIC 243..286 CDD:436441 10/47 (21%)
COG5048 297..>489 CDD:227381 63/226 (28%)
C2H2 Zn finger 298..318 CDD:275368 6/19 (32%)
C2H2 Zn finger 326..348 CDD:275368 9/21 (43%)
C2H2 Zn finger 356..378 CDD:275368 8/21 (38%)
C2H2 Zn finger 386..408 CDD:275368 5/22 (23%)

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