DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and lsy-27

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001256739.1 Gene:lsy-27 / 180149 WormBaseID:WBGene00009834 Length:250 Species:Caenorhabditis elegans


Alignment Length:218 Identity:48/218 - (22%)
Similarity:76/218 - (34%) Gaps:59/218 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   693 PLATKQDLSLHMRHHKNDRRYK--CDKCNKGFVRSSDLSIHVRIHTGEKPYSCDLCGKAFRARQN 755
            |:..|:|..|    .:.|.|.|  |..|::.|..|:.|:.|                     || 
 Worm     7 PVTRKEDTEL----KRPDLRGKFVCSSCSQNFQHSASLNRH---------------------RQ- 45

  Fly   756 LVVHRRTHLGDKPIQCELCDKRFARKIDMRVHMR-RHTGEKPYNCDACQRGYSSRVNLLRHQERE 819
             ::|...|      .|.:|::...:|..:|.||| .|...:.:.|..|...::|:..|..|.:..
 Worm    46 -LMHSNEH------TCMMCERALNQKETIREHMRNEHNLAQVFTCGCCNWTFASKRQLTEHTKCI 103

  Fly   820 HG---------IEEQV--PGSGQADKKHTKTATENEQENEPKAKAAPRRPRREKLQQKIAAQEKL 873
            .|         |.:.:  |||         ......|...|..|...:||....|....:....:
 Worm   104 QGTGAPGDTIPIAKSINAPGS---------LIQSTIQGTPPVVKTGRKRPMGGSLSPSSSVSTSI 159

  Fly   874 LNDLKRSLSAMPEIPEESAQVKL 896
            .:   |..|..|...||.|:.|:
 Worm   160 SS---RDASGSPPPTEEEAERKV 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 21/95 (22%)
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 715..735 CDD:275368 6/19 (32%)
C2H2 Zn finger 743..763 CDD:275368 3/19 (16%)
C2H2 Zn finger 771..791 CDD:275368 7/20 (35%)
zf-H2C2_2 783..808 CDD:463886 7/25 (28%)
C2H2 Zn finger 799..816 CDD:275370 4/16 (25%)
lsy-27NP_001256739.1 COG5236 <22..>122 CDD:227561 27/128 (21%)
C2H2 Zn finger 27..48 CDD:275368 8/43 (19%)
C2H2 Zn finger 54..75 CDD:275368 7/20 (35%)
C2H2 Zn finger 83..102 CDD:275368 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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