DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and ZNF550

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001264019.1 Gene:ZNF550 / 162972 HGNCID:28643 Length:422 Species:Homo sapiens


Alignment Length:220 Identity:42/220 - (19%)
Similarity:73/220 - (33%) Gaps:87/220 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EELKRSLYCLFSQFGRLLDVVALKTP---KLRGQAWVVFT---EVTAASNAVRQMQNFPFYDKPM 82
            |..:.||...:.|:|:|.|.|.::.|   :.||..:|.|:   ||.||..|           :|.
Human    19 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA-----------RPH 72

  Fly    83 RIQYAKSKSDYVTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSMPNGATTQNGMPVPPFQPSG 147
            .|             :|..|..::.:.:||..:...|....:                       
Human    73 SI-------------DGRVVEPKRAVAREESGKPGAHVTVKK----------------------- 101

  Fly   148 QDTMPPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIE-----AKPGIAFVEYED------- 200
                     ||:..:..:|....|:..||:|.....|.:|.     .|.|..||.::|       
Human   102 ---------LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157

  Fly   201 -------------DVQSSMAMQALQ 212
                         :|:.:::.|.:|
Human   158 VLQKYHTINGHNAEVRKALSRQEMQ 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 715..735 CDD:275368
C2H2 Zn finger 743..763 CDD:275368
C2H2 Zn finger 771..791 CDD:275368
zf-H2C2_2 783..808 CDD:463886
C2H2 Zn finger 799..816 CDD:275370
ZNF550NP_001264019.1 KRAB 12..72 CDD:214630 18/63 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..158 11/44 (25%)
COG5048 <200..357 CDD:227381
C2H2 Zn finger 205..225 CDD:275368
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 261..281 CDD:275368
C2H2 Zn finger 289..309 CDD:275368
C2H2 Zn finger 317..337 CDD:275368
C2H2 Zn finger 345..365 CDD:275368
zf-H2C2_2 357..380 CDD:463886
C2H2 Zn finger 373..393 CDD:275368
zf-H2C2_2 385..410 CDD:463886
C2H2 Zn finger 401..421 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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