DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and Gli1

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001178839.1 Gene:Gli1 / 140589 RGDID:621673 Length:1109 Species:Rattus norvegicus


Alignment Length:420 Identity:94/420 - (22%)
Similarity:154/420 - (36%) Gaps:99/420 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   587 EAEVDDDSSATISPHNSSTDESFTSI--KRESSEESQHNGIGGIH--TCNF--CGKTFKRFSRMQ 645
            |..::.|.|   ||:::||.:....:  .||..|..:......::  .|.:  |.:.|....::.
  Rat   192 EEPLEGDMS---SPNSTSTQDHLLGMLDGREDLEREEKPEPESVYETDCRWDGCSQEFDSQEQLV 253

  Fly   646 DHL---RLHTGEKPYVC--GQCGRAFRLKMRLVEHQLRHRAEKAYKCDICSMPLATKQDLSLHMR 705
            .|:   .:|...|.:||  |.|.|..|                         |...:..|.:|||
  Rat   254 HHINSEHIHGERKEFVCHWGGCSRELR-------------------------PFKAQYMLVVHMR 293

  Fly   706 HHKNDRRYKC--DKCNKGFVRSSDLSIHVRIHTGEKPYSCDLCGKAFRARQNLVVHRRTHLGDKP 768
            .|..::.:||  :.|.|.:.|..:|..|:|.|||||||.|:..|                     
  Rat   294 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEQEG--------------------- 337

  Fly   769 IQCELCDKRFARKIDMRVHMRR-HTGEKPYNC--DACQRGYSSRVNLLRHQEREHGIEEQVP--- 827
                 |.|.|:...|...|..| |:.||||.|  ..|.:.|:...:|.:|.:..||.:..|.   
  Rat   338 -----CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRH 397

  Fly   828 -GSGQADKKHTKTATENEQENEPKAKAAPRR---PRREKLQQKIAAQEKLLNDLKRSLSAMPEIP 888
             |.|...:....:..|.::|.|..:.....|   |.....||...||....:|...:.||.....
  Rat   398 RGDGPLPRAQPLSTVEPKREREGGSGREESRLTVPEGTMPQQSPGAQSSCSSDHSPAGSAANTDS 462

  Fly   889 EESAQVKLDGSGQDIPA-DAGAGHAQVQVTLSMQMEPAPNTEDDE--EITP-------------- 936
            .........||.:|:.: |.|...|...::...::|   |...|:  ::.|              
  Rat   463 GVEMAGNAGGSTEDLSSLDEGPCVAATGLSTLRRLE---NLRLDQLHQLRPIGSRGLKLPSLTHA 524

  Fly   937 --EKENALSSSMTADGKTKANRKITSYFTV 964
              .....|...::.|.::.::..|:|.:||
  Rat   525 GAPVSRRLGPPVSLDRRSSSSSSISSAYTV 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 47/205 (23%)
C2H2 Zn finger 631..651 CDD:275368 4/24 (17%)
C2H2 Zn finger 715..735 CDD:275368 7/21 (33%)
C2H2 Zn finger 743..763 CDD:275368 2/19 (11%)
C2H2 Zn finger 771..791 CDD:275368 6/20 (30%)
zf-H2C2_2 783..808 CDD:463886 11/27 (41%)
C2H2 Zn finger 799..816 CDD:275370 4/18 (22%)
Gli1NP_001178839.1 COG5236 <196..>433 CDD:227561 69/290 (24%)
FOXP-CC 237..>265 CDD:465036 5/27 (19%)
C2H2 Zn finger 303..325 CDD:275368 7/21 (33%)
C2H2 Zn finger 333..356 CDD:275368 8/48 (17%)
C2H2 Zn finger 364..385 CDD:275368 5/20 (25%)
PHA03247 <561..867 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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