DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phs and zic5

DIOPT Version :10

Sequence 1:NP_648789.3 Gene:Phs / 39697 FlyBaseID:FBgn0036522 Length:971 Species:Drosophila melanogaster
Sequence 2:XP_002937128.1 Gene:zic5 / 100492793 XenbaseID:XB-GENE-480775 Length:520 Species:Xenopus tropicalis


Alignment Length:276 Identity:66/276 - (23%)
Similarity:101/276 - (36%) Gaps:117/276 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   634 CGKTFKRFSRMQDHLRL-HTG---EKPYVC--GQC---GRAFRLKMRLVEHQLRHRAEKAYKCDI 689
            |.|||.....:.:|:.: |.|   :..:||  .:|   |:.|:.|.:||.               
 Frog   287 CSKTFSTMHELVNHVTVEHVGGPEQSTHVCFWEECSREGKPFKAKYKLVN--------------- 336

  Fly   690 CSMPLATKQDLSLHMRHHKNDRRYKCDKCNKGFVRSSDLSIHVRIHTGEKPYSCDL--CGKAFRA 752
                                                     |:|:||||||:.|..  |||.|..
 Frog   337 -----------------------------------------HIRVHTGEKPFPCPFPGCGKVFAR 360

  Fly   753 RQNLVVHRRTHLGDKPIQCEL--CDKRFARKIDMRVHMRRHTGEKPYNCD--ACQRGYSSRVNLL 813
            .:||.:|:|||.|:||.:||.  ||::||...|.:.|...||.:|||.|.  .|.:.|:...:|.
 Frog   361 SENLKIHKRTHTGEKPFKCEFDGCDRKFANSSDRKKHSHVHTSDKPYYCKVRGCDKSYTHPSSLR 425

  Fly   814 RHQE---------REHG-----------------IEEQVPG--------------------SGQA 832
            :|.:         ..:|                 .:|||.|                    :|.|
 Frog   426 KHMKIHCKSPPGSPTNGSMGYPAVGTPLDDSLSPAQEQVRGRSANRSPQVTNLNEWYVCQATGAA 490

  Fly   833 DKKHTKTATENEQENE 848
            :..||.::..:..|:|
 Frog   491 NNMHTASSNADSSESE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhsNP_648789.3 COG5048 <594..787 CDD:227381 44/165 (27%)
C2H2 Zn finger 631..651 CDD:275368 5/17 (29%)
C2H2 Zn finger 715..735 CDD:275368 2/19 (11%)
C2H2 Zn finger 743..763 CDD:275368 9/21 (43%)
C2H2 Zn finger 771..791 CDD:275368 8/21 (38%)
zf-H2C2_2 783..808 CDD:463886 10/26 (38%)
C2H2 Zn finger 799..816 CDD:275370 4/18 (22%)
zic5XP_002937128.1 zf_ZIC 266..309 CDD:436441 7/21 (33%)
COG5048 <281..431 CDD:227381 55/199 (28%)
C2H2 Zn finger 321..341 CDD:275368 8/75 (11%)
C2H2 Zn finger 349..371 CDD:275368 9/21 (43%)
C2H2 Zn finger 379..401 CDD:275368 8/21 (38%)
C2H2 Zn finger 409..431 CDD:275368 5/21 (24%)

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