DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7650 and Pdcl

DIOPT Version :9

Sequence 1:NP_648786.1 Gene:CG7650 / 39694 FlyBaseID:FBgn0036519 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_071583.1 Gene:Pdcl / 64013 RGDID:621135 Length:301 Species:Rattus norvegicus


Alignment Length:290 Identity:129/290 - (44%)
Similarity:181/290 - (62%) Gaps:31/290 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATLEDKLLGEKLEYYCSSSEGEDNGDEGGD-NKGASGKSRCSGLTIDTNPDATPAGGFRQQSST 64
            |.||:||||||||:||.|:||.||:..|..| .:||...|       .|..:|..||   :..|.
  Rat     1 MTTLDDKLLGEKLQYYYSTSEDEDSDHEDKDRGRGAPASS-------STPAEAELAG---EGISV 55

  Fly    65 NTGPKGVVKDWQRFKQLEAERRDETERQRLALAKKLTITATTSA-EDEERKRQEEL--------- 119
            |||||||:.||:||||||.|:|:|..|:...|.|||:::..:.. |:||:::|::|         
  Rat    56 NTGPKGVINDWRRFKQLETEQREEQCREMERLIKKLSMSCRSHLDEEEEQQKQKDLQEKISGKMT 120

  Fly   120 -------DAELDELMSEDFLQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVEQENKHTT 177
                   |..||:   |:|||||:||||.||.:|.....||.||.::.|.|.||..:::|.|.|.
  Rat   121 LKECGMMDKNLDD---EEFLQQYRKQRMDEMRQQLHKGPQFKQVLEIPSGEGFLDMIDKEQKSTL 182

  Fly   178 IIIHIYERQLAACATLNKCLDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPALLVYKAQAVIGN 242
            |::||||..:.....:|.|:..||::||::||.::.|||.|.|..|....|||||:|||..:|||
  Rat   183 IMVHIYEDGVPGTEAMNGCMICLAAEYPTVKFCRVRSSVIGASSRFTRNALPALLIYKAGELIGN 247

  Fly   243 FVRLTDDLSDDFFASDVESFLIEHGIIVDR 272
            |||:||.|.:||||.|:|:||.|.|::.::
  Rat   248 FVRVTDQLGEDFFAVDLEAFLQEFGLLPEK 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7650NP_648786.1 Phd_like_Phd 60..267 CDD:239285 101/223 (45%)
PdclNP_071583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..60 20/54 (37%)
Phosducin 35..299 CDD:251094 109/256 (43%)
Phd_like_Phd 51..272 CDD:239285 101/223 (45%)
Thioredoxin fold. /evidence=ECO:0000250 158..301 56/120 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352659
Domainoid 1 1.000 191 1.000 Domainoid score I3142
eggNOG 1 0.900 - - E1_KOG3171
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38043
Inparanoid 1 1.050 223 1.000 Inparanoid score I3440
OMA 1 1.010 - - QHG55912
OrthoDB 1 1.010 - - D1324495at2759
OrthoFinder 1 1.000 - - FOG0002881
OrthoInspector 1 1.000 - - otm45977
orthoMCL 1 0.900 - - OOG6_105152
Panther 1 1.100 - - LDO PTHR46052
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2239
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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