DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7650 and Pdcl

DIOPT Version :10

Sequence 1:NP_648786.1 Gene:CG7650 / 39694 FlyBaseID:FBgn0036519 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_071583.1 Gene:Pdcl / 64013 RGDID:621135 Length:301 Species:Rattus norvegicus


Alignment Length:290 Identity:129/290 - (44%)
Similarity:181/290 - (62%) Gaps:31/290 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATLEDKLLGEKLEYYCSSSEGEDNGDEGGD-NKGASGKSRCSGLTIDTNPDATPAGGFRQQSST 64
            |.||:||||||||:||.|:||.||:..|..| .:||...|       .|..:|..||   :..|.
  Rat     1 MTTLDDKLLGEKLQYYYSTSEDEDSDHEDKDRGRGAPASS-------STPAEAELAG---EGISV 55

  Fly    65 NTGPKGVVKDWQRFKQLEAERRDETERQRLALAKKLTITATTSA-EDEERKRQEEL--------- 119
            |||||||:.||:||||||.|:|:|..|:...|.|||:::..:.. |:||:::|::|         
  Rat    56 NTGPKGVINDWRRFKQLETEQREEQCREMERLIKKLSMSCRSHLDEEEEQQKQKDLQEKISGKMT 120

  Fly   120 -------DAELDELMSEDFLQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVEQENKHTT 177
                   |..||:   |:|||||:||||.||.:|.....||.||.::.|.|.||..:::|.|.|.
  Rat   121 LKECGMMDKNLDD---EEFLQQYRKQRMDEMRQQLHKGPQFKQVLEIPSGEGFLDMIDKEQKSTL 182

  Fly   178 IIIHIYERQLAACATLNKCLDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPALLVYKAQAVIGN 242
            |::||||..:.....:|.|:..||::||::||.::.|||.|.|..|....|||||:|||..:|||
  Rat   183 IMVHIYEDGVPGTEAMNGCMICLAAEYPTVKFCRVRSSVIGASSRFTRNALPALLIYKAGELIGN 247

  Fly   243 FVRLTDDLSDDFFASDVESFLIEHGIIVDR 272
            |||:||.|.:||||.|:|:||.|.|::.::
  Rat   248 FVRVTDQLGEDFFAVDLEAFLQEFGLLPEK 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7650NP_648786.1 Phd_like_Phd 60..267 CDD:239285 101/223 (45%)
PdclNP_071583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..60 20/54 (37%)
Phosducin 35..299 CDD:251094 109/256 (43%)
Thioredoxin fold. /evidence=ECO:0000250 158..301 56/120 (47%)

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