DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7650 and Pdc

DIOPT Version :9

Sequence 1:NP_648786.1 Gene:CG7650 / 39694 FlyBaseID:FBgn0036519 Length:276 Species:Drosophila melanogaster
Sequence 2:XP_038946308.1 Gene:Pdc / 25343 RGDID:3277 Length:274 Species:Rattus norvegicus


Alignment Length:275 Identity:90/275 - (32%)
Similarity:151/275 - (54%) Gaps:32/275 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CSSSEGEDNGDEGGDNKGASGKSRCSGLTIDTNPDATP----------AGGFRQQSSTNTGPKGV 71
            |:.|   |.|..||...||            |.|:.|.          ...|..| :|:||||||
  Rat     5 CACS---DRGIRGGAEAGA------------TTPNTTHKMEEAASQSLEEDFEGQ-ATHTGPKGV 53

  Fly    72 VKDWQRFKQLEAERRDETERQRLALAKKLTITATTSAEDEERKRQEELDAELDELMSED-----F 131
            :.||::|| ||:|..|.....:..:.::::...:...:|.:.:...::..:..||:.:|     .
  Rat    54 INDWRKFK-LESEDGDSIPPSKKEILRQMSSPQSRDDKDSKERMSRKMSIQEYELIHQDKEDEGC 117

  Fly   132 LQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVEQENKHTTIIIHIYERQLAACATLNKC 196
            |::|::|.|.:|.::.....::|.|.:|.:.|:||..:|:|.|.|||:::|||..:..|..||..
  Rat   118 LRKYRRQCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSS 182

  Fly   197 LDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPALLVYKAQAVIGNFVRLTDDLSDDFFASDVES 261
            |:.||::||.:||.||.:|..|....|.:..||.|||||...:|.||:.:.:..::||||:||||
  Rat   183 LECLAAEYPMVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVES 247

  Fly   262 FLIEHGIIVDRALYN 276
            ||.|:|::.:|.:::
  Rat   248 FLNEYGLLPEREIHD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7650NP_648786.1 Phd_like_Phd 60..267 CDD:239285 76/211 (36%)
PdcXP_038946308.1 Phosducin 29..274 CDD:251094 79/236 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352656
Domainoid 1 1.000 191 1.000 Domainoid score I3142
eggNOG 1 0.900 - - E1_KOG3171
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55912
OrthoDB 1 1.010 - - D1324495at2759
OrthoFinder 1 1.000 - - FOG0002881
OrthoInspector 1 1.000 - - otm45977
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46052
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2239
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.820

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