DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7656 and ube2e2

DIOPT Version :9

Sequence 1:NP_648783.4 Gene:CG7656 / 39691 FlyBaseID:FBgn0036516 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001003494.1 Gene:ube2e2 / 445100 ZFINID:ZDB-GENE-040801-237 Length:201 Species:Danio rerio


Alignment Length:187 Identity:53/187 - (28%)
Similarity:81/187 - (43%) Gaps:36/187 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ASTSQHATSSSTMMAGSGSLATSSSA--------AAP---TTTPSSSAVRALAMEYKSLQEEPVE 58
            :|..|....|.:...||..:....:|        .||   .|..||.....|:...|.:|:|..|
Zfish     2 SSEVQRPDDSPSTSGGSSDIEQRETAPPQQERDLVAPKKKETKISSKTAAKLSTSAKRIQKELAE 66

  Fly    59 GFRVKL---------INDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPHDYPYSPPSIRFLTKVW 114
               :.|         ...||::||...|.|||.::|:||.|...:.|..|||:.||.:.|.|:::
Zfish    67 ---ITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIAFTPDYPFKPPKVTFRTRIY 128

  Fly   115 HPNVYENGDLCISILHPPVDDPQSGELPCERWNPTQNVRTILLSVISLLNEPNTFSP 171
            |.|:...|.:|:.||.             :.|:|...:..:|||:.|||.:.|...|
Zfish   129 HCNINSQGVICLDILK-------------DNWSPALTISKVLLSICSLLTDCNPADP 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7656NP_648783.4 UBCc 42..186 CDD:238117 42/139 (30%)
COG5078 45..182 CDD:227410 42/136 (31%)
ube2e2NP_001003494.1 UQ_con 59..196 CDD:395127 40/130 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.